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{
    "id": 564,
    "name": "Introduction to Structural variant detection analyses 2022",
    "shortName": "",
    "description": "Program\r\n\r\n*  Handling mapping tools suitable for ILLUMINA and ONT data (bwa, minimap2)\r\n*  SNP detection from mapping of short reads against a reference genome: SNP calling, filters and SNP annotation. Examples of possible studies based on SNP arrays\r\n* Detecting Structural Variations (SV) in short and long reads (breakdancer, sniffle)\r\n* SV detection from genome assembly and comparison (minimap2, nucmer, assemblytics, siry)",
    "homepage": "https://southgreenplatform.github.io/trainings//sv/",
    "is_draft": false,
    "costs": [
        "Free"
    ],
    "topics": [],
    "keywords": [],
    "prerequisites": [
        "Linux and knowledge of NGS formats"
    ],
    "openTo": "Internal personnel",
    "accessConditions": "Open to South Green close collaborators",
    "maxParticipants": null,
    "contacts": [],
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    "sponsoredBy": [],
    "organisedByOrganisations": [],
    "organisedByTeams": [
        {
            "id": 24,
            "name": "South Green",
            "url": "https://catalogue.france-bioinformatique.fr/api/team/South%20Green/?format=api"
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    ],
    "logo_url": "https://southgreenplatform.github.io/trainings//images/southgreenlong.png",
    "updated_at": "2023-12-04T15:32:04.974511Z",
    "type": "Training course",
    "start_date": "2022-06-21",
    "end_date": "2022-06-24",
    "venue": "",
    "city": "montpellier",
    "country": "france",
    "geographical_range": "",
    "trainers": [],
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    "realisation_status": "past",
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    "registration_status": "unknown",
    "courseMode": "Onsite"
}