Training Material Instance

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{
    "id": 134,
    "name": "Nucleoli segmentation and feature extraction using CellProfiler",
    "description": "This tutorial covers the following questions:\r\n- How do I run an image analysis pipeline on public data using CellProfiler?\r\n- How do I analyse the DNA channel of fluorescence siRNA screens?\r\n- How do I download public image data into my history?\r\n- How do I segment and label cell nuclei?\r\n- How do I segment nucleoli (as the absence of DNA)?\r\n- How do I combine nuclei and nucleoli into one segmentation mask?\r\n- How do I extract the background of an image?\r\n- How do I relate the nucleoli to their parent nucleus?\r\n- How do I measure the image and object features?\r\n- How do I measure the image quality?\r\n\r\nAt the end of the tutorial, learners would be able to:\r\n- How to download images from a public image repository.\r\n- How to segment cell nuclei using CellProfiler in Galaxy.\r\n- How to segment cell nucleoli using CellProfiler in Galaxy.\r\n- How to extract features for images, nuclei and nucleoli.",
    "communities": [],
    "elixirPlatforms": [],
    "doi": null,
    "fileLocation": "https://training.galaxyproject.org/training-material/topics/imaging/tutorials/tutorial-CP/tutorial.html",
    "fileName": "tutorial-CP",
    "topics": [
        "http://edamontology.org/topic_3383",
        "http://edamontology.org/topic_3382"
    ],
    "keywords": [
        "Galaxy"
    ],
    "audienceTypes": [
        "Undergraduate",
        "Graduate",
        "Professional (initial)",
        "Professional (continued)"
    ],
    "audienceRoles": [
        "Researchers",
        "Life scientists",
        "Biologists"
    ],
    "difficultyLevel": "Novice",
    "providedBy": [],
    "dateCreation": null,
    "dateUpdate": null,
    "licence": "CC-BY-4.0",
    "maintainers": [
        "https://catalogue.france-bioinformatique.fr/api/userprofile/677/?format=api"
    ]
}