Training List
Handles creating, reading and updating training events.
GET /api/training/?format=api&offset=40&ordering=-openTo
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Découvrir les bonnes pratiques dans Galaxy. Organisée en collaboration avec la plateforme Bioinfo Genotoul.\n\n\n", "homepage": "", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Galaxy" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "Avoir un compte sur la plateforme Bioinfo Genotoul (demande via un formulaire web sur notre site), s’inscrire (via notre site web) et payer 150 euros la journée pour un académique et 500 euros la journée pour un privé.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 111, "name": "Spectrométrie de masse, analyse protéomique et interprétation des données", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Autre" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 317, "name": "Datathon AGENT - FAIRDOM", "shortName": "FAIRDOM", "description": "Datathon on experimental phenotypic data management using the FAIRDOM platform, and submission workflow using curation & validation tools.", "homepage": "", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3572", "http://edamontology.org/topic_3365", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091", "http://edamontology.org/topic_3571", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_3366" ], "keywords": [ "Données" ], "prerequisites": [ "Attendees will bring their own data" ], "openTo": "Internal personnel", "accessConditions": "For H2020-AGENT project members only", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/504/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 21, "name": "H2020-AGENT", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/H2020-AGENT/?format=api" } ], "organisedByOrganisations": [ { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" }, { "id": 39, "name": "URGI - US1164", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/URGI%20-%20US1164/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-13T13:27:42.544621Z", "audienceTypes": [ "Graduate", "Professional (initial)", "Professional (continued)" ], "audienceRoles": [ "All" ], "difficultyLevel": "Novice", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": true, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/737/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/735/?format=api" ] }, { "id": 367, "name": "Introduction à l'analyse de données de séquençage avec contrôle qualité et alignement sur un génome de référence avec Galaxy", "shortName": "", "description": "L’objectif de cette formation est de se familiariser avec les premières étapes communes à toutes les analyses de données de séquençage : le contrôle qualité des données et l’alignement sur un génome de référence. Nous proposons au personnel non-bioinformaticien de les accompagner dans la prise en main des ces étapes d’analyses en utilisant la plateforme de bio-analyse Galaxy. \r\n\r\nAprès une introduction aux données de séquençage, une session pratique sur la plateforme Galaxy couvrira comment :\r\n- évaluer la qualité de données de séquençage,\r\n- améliorer la qualité de données de séquençage\r\n- aligner des données sur un génome de référence", "homepage": "", "is_draft": false, "costs": [ "Free to academics" ], "topics": [ "http://edamontology.org/topic_0091", "http://edamontology.org/topic_0102" ], "keywords": [ "Quality Control", "Galaxy", "Mapping" ], "prerequisites": [ "Galaxy - Basic usage" ], "openTo": "Internal personnel", "accessConditions": "Formation ouverte au personnel de l’UCA & Associés\r\nAvoir un ordinateur portable et un accès wifi eduroam\r\nAvoir un compte sur la plateforme Galaxy (Faire une demande le cas échéant sur hub.mesocentre.uca.fr)\r\nÊtre familier avec Galaxy", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/261/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/677/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 1, "name": "CNRS - IFB", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/CNRS%20-%20IFB/?format=api" }, { "id": 16, "name": "Université Clermont Auvergne", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Universit%C3%A9%20Clermont%20Auvergne/?format=api" } ], "organisedByOrganisations": [ { "id": 96, "name": "Mésocentre Clermont-Auvergne", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/M%C3%A9socentre%20Clermont-Auvergne/?format=api" }, { "id": 87, "name": "AuBi", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/AuBi/?format=api" } ], "organisedByTeams": [ { "id": 31, "name": "AuBi", "url": "https://catalogue.france-bioinformatique.fr/api/team/AuBi/?format=api" } ], "logo_url": "https://mesocentre.uca.fr/medias/photo/logoaubi-2019minus_1553844844490-jpg?ID_FICHE=41175", "updated_at": "2024-02-08T11:22:59.733596Z", "audienceTypes": [ "Undergraduate", "Graduate", "Professional (initial)", "Professional (continued)" ], "audienceRoles": [ "Researchers", "Life scientists", "Biologists" ], "difficultyLevel": "Novice", "trainingMaterials": [ { "id": 128, "name": "Mapping with Galaxy", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Mapping%20with%20Galaxy/?format=api" }, { "id": 127, "name": "Quality Control with Galaxy", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Quality%20Control%20with%20Galaxy/?format=api" } ], "learningOutcomes": "At the end of the tutorial, learners would be able to:\r\n- Assess short reads FASTQ quality using FASTQE 🧬😎 and FastQC\r\n- Assess long reads FASTQ quality using Nanoplot and PycoQC\r\n- Perform quality correction with Cutadapt (short reads)\r\n- Summarise quality metrics MultiQC\r\n- Process single-end and paired-end data\r\n- Define what mapping is\r\n- Perform mapping of reads on a reference genome\r\n- Evaluate the mapping output", "hoursPresentations": 1, "hoursHandsOn": 2, "hoursTotal": 3, "personalised": null, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/593/?format=api" ] }, { "id": 28, "name": "Initiation à R", "shortName": "", "description": "\nObjectifs\n\n- Présenter le langage de programmation R et ses principes.\n- Utiliser les principales fonctionnalités de ce langage pour effectuer des calculs mathématiques, statistiques ou des représentations graphiques.\n- Attention : ce module n'est ni un module de statistique, ni un module d'analyse statistique des données.\n\nProgramme\n\n- Structures et manipulation de données.\n- Principaux éléments du langage de programmation (boucle, fonctions…).\n- Différentes représentations graphiques de données/résultats (plot, histogramme, boxplot).\n", "homepage": "http://migale.jouy.inra.fr/", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Programming Languages & Computer Sciences", "R Language" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "Ce cycle est ouvert à l'ensemble des agents de l'INRA et aux extérieurs.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/251/?format=api" ] }, { "id": 29, "name": "Initiation à Python", "shortName": "", "description": "\nObjectifs\n\nInitiation à la programmation.\nRéalisation de tâches simples d'extractions d'informations.\nIdentifier les possibilités offertes par l'écriture de quelques lignes de codes.\n \n\n \n \n \n \nProgramme\n\n• Présentation de Python\n• Variables Python\n• Structures de contrôle\n• Réalisation de programmes simples\n• Gestion de fichiers\n• Fonctions\nIllustration avec des exercices de manipulation de fichiers de séquences\n", "homepage": "http://migale.jouy.inra.fr/", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Programming Languages & Computer Sciences", "Python Language" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "Ce cycle est ouvert à l'ensemble des agents de l'INRA et aux extérieurs.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], 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"personalised": null, "event_set": [] }, { "id": 124, "name": "Intégration d’outils dans la plateforme web GALAXY ", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Galaxy" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 125, "name": "Cluster ", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Programming Languages & Computer Sciences", "Autres langages" ], "prerequisites": [], 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Aucun pré-requis en informatique n'est attendu.\r\nLe cycle est constitué de quatre modules de deux jours:\r\n- Banques de données et BLAST\r\n- Alignement de séquences\r\n- Prédiction de gènes et annotation de protéines\r\n- Initiation à la reconstruction phylogénétique en biologie moléculaire\r\nCes modules peuvent être suivis indépendamment, mais ont une cohérence. Suivre chaque module peut aider à une meilleure compréhension des modules suivants.\r\nLes fiches descriptives des différents modules sont accessibles sur le site web de Bilille.\r\nLes objectifs du module 1 sont :\r\n- Découvrir différentes banques de données de séquences généralistes\r\n- Savoir interroger les banques de données et réaliser des requêtes pertinentes\r\n- Comprendre la structure des données\r\n- Savoir utiliser de manière optimale le logiciel Blast en fonction de l'application visée (ex : recherche d’homologie, prédiction de gènes…)\r\n- Etre capable d'analyser un résultat avec un regard critique", "homepage": "https://bilille.univ-lille.fr/training/training-offer", "is_draft": false, "costs": [], "topics": [], "keywords": [ "Autre", "Sequence analysis", "Multiple sequence alignment", "Databases and information systems" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "Savoir utiliser un ordinateur (Windows...) : naviguer sur internet (Internet Explorer ou Firefox), utiliser un traitement de texte (Word ou OpenOffice).", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 3, "name": "Bilille", "url": "https://catalogue.france-bioinformatique.fr/api/team/Bilille/?format=api" } ], "logo_url": "https://bilille.univ-lille.fr/fileadmin/_processed_/9/2/csm_logo_bilille_complet_65be9bda8b.png", "updated_at": "2024-12-09T17:42:24.618464Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 347, "name": "Introduction to Microbial Comparative Genomics", "shortName": "", "description": "This course offers an introduction to microbial genomics analysis.\r\nIt includes 5 issues: assembly, genome annotation, circos visualization, pan-genome construction, pan-GWAS.", "homepage": "https://southgreenplatform.github.io/trainings//bacterialGenomics/", "is_draft": false, "costs": [ "Free" ], "topics": [], "keywords": [ "genomics", "Structural genomics", "Genome analysis" ], "prerequisites": [ "Linux - 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