Handles creating, reading and updating training materials.

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                "https://catalogue.france-bioinformatique.fr/api/userprofile/677/"
            ]
        },
        {
            "id": 144,
            "name": "Reference-based RNA-Seq data analysis with Galaxy",
            "description": "This tutorial covers the questions:\r\n- What are the steps to process RNA-Seq data?\r\n- How to identify differentially expressed genes across multiple experimental conditions?\r\n- What are the biological functions impacted by the differential expression of genes?\r\n\r\nAt the end of the tutorial, learners would be able to:\r\n- Check a sequence quality report generated by FastQC for RNA-Seq data\r\n- Explain the principle and specificity of mapping of RNA-Seq data to an eukaryotic reference genome\r\n- Select and run a state of the art mapping tool for RNA-Seq data\r\n- Evaluate the quality of mapping results\r\n- Describe the process to estimate the library strandness\r\n- Estimate the number of reads per genes\r\n- Explain the count normalization to perform before sample comparison\r\n- Construct and run a differential gene expression analysis\r\n- Analyze the DESeq2 output to identify, annotate and visualize differentially expressed genes\r\n- Perform a gene ontology enrichment analysis\r\n- Perform and visualize an enrichment analysis for KEGG pathways",
            "communities": [],
            "elixirPlatforms": [],
            "doi": null,
            "fileLocation": "https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/ref-based/tutorial.html",
            "fileName": "rna-seq",
            "topics": [
                "http://edamontology.org/topic_0102",
                "http://edamontology.org/topic_1775",
                "http://edamontology.org/topic_0203",
                "http://edamontology.org/topic_3308",
                "http://edamontology.org/topic_3170"
            ],
            "keywords": [
                "Galaxy",
                "RNA-seq"
            ],
            "audienceTypes": [
                "Undergraduate",
                "Graduate",
                "Professional (initial)",
                "Professional (continued)"
            ],
            "audienceRoles": [
                "Researchers",
                "Life scientists",
                "Biologists"
            ],
            "difficultyLevel": "Novice",
            "providedBy": [],
            "dateCreation": null,
            "dateUpdate": null,
            "licence": "CC-BY-4.0",
            "maintainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/677/"
            ]
        },
        {
            "id": 125,
            "name": "ETBII 2023",
            "description": "All the training materials dedicated to the IFB's Integrative Bioinformatics Thematic School, which took place in January 2023.",
            "communities": [],
            "elixirPlatforms": [],
            "doi": null,
            "fileLocation": "https://moodle.france-bioinformatique.fr/course/view.php?id=13",
            "fileName": "ETBII 2023 Training materials",
            "topics": [
                "http://edamontology.org/topic_3316",
                "http://edamontology.org/topic_3474",
                "http://edamontology.org/topic_3391",
                "http://edamontology.org/topic_3365",
                "http://edamontology.org/topic_2269",
                "http://edamontology.org/topic_0092",
                "http://edamontology.org/topic_0091",
                "http://edamontology.org/topic_3307"
            ],
            "keywords": [
                "Biological network inference and analysis",
                "Multivariate analyses",
                "Semantic web",
                "Data Integration"
            ],
            "audienceTypes": [
                "Professional (initial)"
            ],
            "audienceRoles": [
                "Life scientists",
                "Computer scientists",
                "Bioinformaticians"
            ],
            "difficultyLevel": "Novice",
            "providedBy": [
                {
                    "id": 29,
                    "name": "IFB Core",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/IFB%20Core/"
                }
            ],
            "dateCreation": null,
            "dateUpdate": null,
            "licence": null,
            "maintainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/762/"
            ]
        },
        {
            "id": 132,
            "name": "Metatranscriptomics analysis using microbiome RNA-seq data",
            "description": "This tutorial covers the questions:\r\n- How to analyze metatranscriptomics data?\r\n- What information can be extracted of metatranscriptomics data?\r\n- How to assign taxa and function to the identified sequences?\r\n\r\nAt the end of the tutorial, learners would be able to:\r\n- Choose the best approach to analyze metatranscriptomics data\r\n- Understand the functional microbiome characterization using metatranscriptomic results\r\n- Understand where metatranscriptomics fits in ‘multi-omic’ analysis of microbiomes\r\n- Visualise a community structure",
            "communities": [],
            "elixirPlatforms": [],
            "doi": null,
            "fileLocation": "https://training.galaxyproject.org/training-material/topics/microbiome/tutorials/metatranscriptomics/tutorial.html",
            "fileName": "metatranscriptomics",
            "topics": [
                "http://edamontology.org/topic_3941",
                "http://edamontology.org/topic_1775"
            ],
            "keywords": [
                "Galaxy"
            ],
            "audienceTypes": [
                "Undergraduate",
                "Graduate",
                "Professional (initial)",
                "Professional (continued)"
            ],
            "audienceRoles": [
                "Researchers",
                "Life scientists",
                "Biologists"
            ],
            "difficultyLevel": "Novice",
            "providedBy": [],
            "dateCreation": null,
            "dateUpdate": null,
            "licence": "CC-BY-4.0",
            "maintainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/677/"
            ]
        },
        {
            "id": 130,
            "name": "Taxonomic Profiling and Visualization of Metagenomic Data",
            "description": "This tutorial covers the questions:\r\n- Which species (or genera, families, …) are present in my sample?\r\n- What are the different approaches and tools to get the community profile of my sample?\r\n- How can we visualize and compare community profiles?\r\n\r\nAt the end of the tutorial, learners would be able to:\r\n- Explain what taxonomic assignment is\r\n- Explain how taxonomic assignment works\r\n- Apply Kraken and MetaPhlAn to assign taxonomic labels\r\n- Apply Krona and Pavian to visualize results of assignment and understand the output\r\n- Identify taxonomic classification tool that fits best depending on their data",
            "communities": [],
            "elixirPlatforms": [],
            "doi": null,
            "fileLocation": "https://training.galaxyproject.org/training-material/topics/microbiome/tutorials/taxonomic-profiling/tutorial.html",
            "fileName": "taxonomic-profiling",
            "topics": [
                "http://edamontology.org/topic_3697",
                "http://edamontology.org/topic_3174",
                "http://edamontology.org/topic_0637"
            ],
            "keywords": [
                "Galaxy"
            ],
            "audienceTypes": [
                "Undergraduate",
                "Graduate",
                "Professional (initial)",
                "Professional (continued)"
            ],
            "audienceRoles": [
                "Researchers",
                "Life scientists",
                "Biologists"
            ],
            "difficultyLevel": "Novice",
            "providedBy": [],
            "dateCreation": null,
            "dateUpdate": null,
            "licence": "CC-BY-4.0",
            "maintainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/677/"
            ]
        }
    ]
}