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Nous proposons au personnel non-bioinformaticien de les accompagner dans la prise en main des ces étapes d’analyses en utilisant la plateforme de bio-analyse Galaxy. \r\n\r\nAprès une introduction aux données de séquençage, une session pratique sur la plateforme Galaxy couvrira comment :\r\n- évaluer la qualité de données de séquençage,\r\n- améliorer la qualité de données de séquençage\r\n- aligner des données sur un génome de référence","homepage":"","is_draft":false,"costs":["Free to academics"],"topics":["http://edamontology.org/topic_0091","http://edamontology.org/topic_0102"],"keywords":["Quality Control","Galaxy","Mapping"],"prerequisites":["Galaxy - Basic usage"],"openTo":"Internal personnel","accessConditions":"Formation ouverte au personnel de l’UCA & Associés\r\nAvoir un ordinateur portable et un accès wifi eduroam\r\nAvoir un compte sur la plateforme Galaxy (Faire une demande le cas échéant sur hub.mesocentre.uca.fr)\r\nÊtre familier avec Galaxy","maxParticipants":null,"contacts":["https://catalogue.france-bioinformatique.fr/api/userprofile/261/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/677/?format=json"],"elixirPlatforms":[],"communities":[],"sponsoredBy":[{"id":1,"name":"CNRS - IFB","url":"https://catalogue.france-bioinformatique.fr/api/eventsponsor/CNRS%20-%20IFB/?format=json"},{"id":16,"name":"Université Clermont Auvergne","url":"https://catalogue.france-bioinformatique.fr/api/eventsponsor/Universit%C3%A9%20Clermont%20Auvergne/?format=json"}],"organisedByOrganisations":[{"id":87,"name":"AuBi","url":"https://catalogue.france-bioinformatique.fr/api/organisation/AuBi/?format=json"},{"id":96,"name":"Mésocentre Clermont-Auvergne","url":"https://catalogue.france-bioinformatique.fr/api/organisation/M%C3%A9socentre%20Clermont-Auvergne/?format=json"}],"organisedByTeams":[{"id":31,"name":"AuBi","url":"https://catalogue.france-bioinformatique.fr/api/team/AuBi/?format=json"}],"logo_url":"https://mesocentre.uca.fr/medias/photo/logoaubi-2019minus_1553844844490-jpg?ID_FICHE=41175","updated_at":"2024-02-08T11:22:59.733596Z","audienceTypes":["Undergraduate","Graduate","Professional (initial)","Professional (continued)"],"audienceRoles":["Researchers","Life scientists","Biologists"],"difficultyLevel":"Novice","trainingMaterials":[{"id":128,"name":"Mapping with Galaxy","url":"https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Mapping%20with%20Galaxy/?format=json"},{"id":127,"name":"Quality Control with Galaxy","url":"https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Quality%20Control%20with%20Galaxy/?format=json"}],"learningOutcomes":"At the end of the tutorial, learners would be able to:\r\n- Assess short reads FASTQ quality using FASTQE 🧬😎 and FastQC\r\n- Assess long reads FASTQ quality using Nanoplot and PycoQC\r\n- Perform quality correction with Cutadapt (short reads)\r\n-  Summarise quality metrics MultiQC\r\n- Process single-end and paired-end data\r\n- Define what mapping is\r\n- Perform mapping of reads on a reference genome\r\n- Evaluate the mapping output","hoursPresentations":1,"hoursHandsOn":2,"hoursTotal":3,"personalised":null,"event_set":["https://catalogue.france-bioinformatique.fr/api/event/593/?format=json"]},{"id":367,"name":"Introduction à l'analyse de données de séquençage avec contrôle qualité et alignement sur un génome de référence avec Galaxy","shortName":"","description":"L’objectif de cette formation est de se familiariser avec les premières étapes communes à toutes les analyses de données de séquençage : le contrôle qualité des données et l’alignement sur un génome de référence. 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