Training List
Handles creating, reading and updating training events.
GET /api/training/?format=api&offset=380&ordering=-personalised
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Introduction aux bibliothèques R utiles en biologie.", "homepage": "http://www.prabi.fr/spip.php?article273", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 14, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 19, "name": "PRABI-AMSB", "url": "https://catalogue.france-bioinformatique.fr/api/team/PRABI-AMSB/?format=api" } ], "logo_url": null, "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [ "Professional (initial)" ], "audienceRoles": [ "Life scientists" ], "difficultyLevel": "Novice", "trainingMaterials": [], "learningOutcomes": "- Acquérir les compétences nécessaires à l’utilisation du logiciel R\r\n- Connaître les principales analyses statistiques nécessaires en biologie et les utiliser sous R\r\n- Réaliser des graphiques sous R\r\n- Connaitre les bibliothèques R utiles en Biologie", "hoursPresentations": 9, "hoursHandsOn": 12, "hoursTotal": 21, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/437/?format=api" ] }, { "id": 274, "name": "Principes FAIR pour la gestion des données de recherche en sciences de la vie", "shortName": "FAIR data", "description": "Présentation et application des principes FAIR de gestion des données dans un projet bioinformatique.\r\nL’Institut Français de Bioinformatique (IFB) organise une formation à destination de bioinformaticiens, biologistes et médecins impliqués dans des projets d’analyse bioinformatique de jeux de données omiques et souhaitant mettre en œuvre les principes “FAIR” (Facile à trouver, Accessible, Interopérable, Réutilisable) tout au long du déroulement du projet. La formation abordera les différents points fondamentaux (théoriques, pratiques, juridiques) en lien avec la politique nationale d’ouverture des données de la recherche et présentera sous forme de séances pratiques les ressources nationales accessibles à la communauté scientifique ainsi que les solutions proposées par l’IFB pour gérer les données d’un projet de recherche.", "homepage": "https://ifb-elixirfr.github.io/IFB-FAIR-data-training/", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3571", "http://edamontology.org/topic_3420", "http://edamontology.org/topic_0219" ], "keywords": [ "Données" ], "prerequisites": [], "openTo": "Everyone", "accessConditions": "public", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 3, "name": "IFB", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/IFB/?format=api" } ], "organisedByOrganisations": [ { "id": 43, "name": "IFB-core", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IFB-core/?format=api" } ], "organisedByTeams": [ { "id": 29, "name": "IFB Core", "url": "https://catalogue.france-bioinformatique.fr/api/team/IFB%20Core/?format=api" } ], "logo_url": "https://www.france-bioinformatique.fr/wp-content/uploads/logo-ifb-couleur.svg", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "Novice", "trainingMaterials": [], "learningOutcomes": "A la fin de cette formation, les participants connaîtront et pourront mettre en œuvre les principes de la science ouverte pour gérer leurs jeux de données dans un projet :\r\n- Les principes fondamentaux de l’Open Data en biologie et santé, y compris dans ses aspects juridiques ;\r\n- Les bonnes pratiques et outils de gestion des données d’un projet en bioinformatique, en lien avec les ressources de l’infrastructure IFB ;\r\n- Le PGD : séances théoriques et pratiques de construction d’un PGD sur des exemples de jeux de données omiques ;\r\n- Le choix des métadonnées : panorama des ressources existantes pour choisir des métadonnées et mise en pratique pour annoter des jeux de données omiques en vue de la publication des données dans une banque internationale ou un dataverse institutionnel.", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/418/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/404/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/465/?format=api" ] }, { "id": 397, "name": "WheatIS data discovery", "shortName": "WheatIS Search", "description": "The WheatIS project aims at building an International Wheat Information System to support the wheat research community. The main objective is to provide a single-access web base system to access to the available data resources and bioinformatics tools. The project is endorsed by the Wheat Initiative.\r\nThe WheatIS data discovery tool allows to search data in all the wheat resources around the world.\r\nThis training will describe how to use the tool, what data are available, how to join, etc.", "homepage": "", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3366", "http://edamontology.org/topic_3489", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [], "openTo": "Everyone", "accessConditions": "Public", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/224/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 20, "name": "Wheat Initiative", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Wheat%20Initiative/?format=api" } ], "organisedByOrganisations": [ { "id": 39, "name": "URGI - US1164", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/URGI%20-%20US1164/?format=api" }, { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-12T12:46:23.549824Z", "audienceTypes": [ "Undergraduate", "Graduate", "Professional (initial)", "Professional (continued)" ], "audienceRoles": [ "All" ], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/727/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/728/?format=api" ] }, { "id": 313, "name": "RNA-Seq analysis", "shortName": "", "description": "Introduction to RNA-Seq analysis", "homepage": "https://southgreenplatform.github.io/trainings//rnaseq/", "is_draft": false, "costs": [ "Free" ], "topics": [], "keywords": [], "prerequisites": [ "Linux - Basic Knowledge" ], "openTo": "Internal personnel", "accessConditions": "Open to South Green close collaborators", "maxParticipants": 15, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 24, "name": "South Green", "url": "https://catalogue.france-bioinformatique.fr/api/team/South%20Green/?format=api" } ], "logo_url": "https://southgreenplatform.github.io/trainings//images/southgreenlong.png", "updated_at": "2023-12-04T15:04:39.023455Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "Intermediate", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": 6, "hoursHandsOn": 8, "hoursTotal": 14, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/473/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/471/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/563/?format=api" ] }, { "id": 315, "name": "Using sed and awk to modify large large text files", "shortName": "", "description": "Many analysis generate large result text files which have to be checked, merged, split, reduced. Several tools have been developed and are available on Unix to do this, including sed and AWK. During this course you will be trained to process large files with sed and AWK. Sed is tool enabling to select and process lines. You can easily insert, delete, modify, append lines to very large files with millions of lines. AWK will enable to perform more fine tuned file modifications based on columns. It includes also more mathematical and string functions. The course is based mainly on exercises with small sections presenting concepts and commands.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/modify-and-extract-information-from-large-text-files-day-2-3/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [], "prerequisites": [ "Linux/Unix" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/338/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2025-12-09T10:31:46.651968Z", "audienceTypes": [ "Professional (continued)" ], "audienceRoles": [ "Biologists" ], "difficultyLevel": "Novice", "trainingMaterials": [ { "id": 146, "name": "Processing large files with sed awk - Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Processing%20large%20files%20with%20sed%20awk%20%20-%20Genotoul-bioinfo/?format=api" } ], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/478/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/479/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/611/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/631/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/669/?format=api" ] }, { "id": 295, "name": "Introduction to the use of a computing cluster", "shortName": "", "description": "Knowledge of the concepts and best practices for using the computing resources of the mesocenter cluster Clermont Auvergne in a bioinformatics context.\r\nBecome familiar with the work environment of the computing cluster, become autonomous in the use of its resources and learn to use a scheduler. \r\nPresentation of the resources accessible on the cluster (computing nodes, storage spaces, tools).\r\nConcept of jobs, queues and parallel computing.\r\nJob management (submission, follow-up, deletion).", "homepage": "https://mesocentre.uca.fr/", "is_draft": false, "costs": [ "Free to academics" ], "topics": [ "http://edamontology.org/topic_0605", "http://edamontology.org/topic_0091" ], "keywords": [], "prerequisites": [ "Linux and knowledge of NGS formats" ], "openTo": "Internal personnel", "accessConditions": "Have an account on the Mesocentre UCA computing cluster (make a request if necessary on the site https://hub.mesocentre.uca.fr)\r\nAlternation of theoretical courses and practical work.\r\nCOME WITH A LAPTOP with an operational Eduroam connection.\r\nThe training is in French.", "maxParticipants": 10, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 45, "name": "UMR 454 MEDIS INRA-Université Clermont Auvergne", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/UMR%20454%20MEDIS%20INRA-Universit%C3%A9%20Clermont%20Auvergne/?format=api" } ], "organisedByTeams": [ { "id": 31, "name": "AuBi", "url": "https://catalogue.france-bioinformatique.fr/api/team/AuBi/?format=api" } ], "logo_url": null, "updated_at": "2023-01-24T10:21:58.347905Z", "audienceTypes": [ "Graduate" ], "audienceRoles": [ "Researchers", "Computer scientists" ], "difficultyLevel": "Novice", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": 3, "hoursHandsOn": 4, "hoursTotal": 8, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/487/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/616/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/461/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/751/?format=api", "https://catalogue.france-bioinformatique.fr/api/event/708/?format=api" ] }, { "id": 350, "name": "Formation Principes FAIR dans un projet de bioinformatique", "shortName": "FAIR-Bioinfo-Strasbourg", "description": "Cette formation sur 3 jours est destinée à des bioinformaticiens et biostatisticiens souhaitant acquérir des compétences théoriques et pratiques sur les principes \"FAIR\" (Facile à trouver, Accessible, Interopérable, Réutilisable) appliqués à un projet d'analyse et/ou de développement.", "homepage": "", "is_draft": false, "costs": [ "Free to academics" ], "topics": [], "keywords": [ "Programming Languages & Computer Sciences", "FAIR", "Snakemake", "Docker" ], "prerequisites": [ "Linux - Basic Knowledge" ], "openTo": "Everyone", "accessConditions": "Academics", "maxParticipants": 14, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/563/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/124/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 79, "name": "IBMP", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IBMP/?format=api" }, { "id": 83, "name": "IGBMC", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IGBMC/?format=api" } ], "organisedByTeams": [ { "id": 14, "name": "BiGEst", "url": "https://catalogue.france-bioinformatique.fr/api/team/BiGEst/?format=api" } ], "logo_url": null, "updated_at": "2023-12-20T15:44:00.254606Z", "audienceTypes": [ "Professional (continued)" ], "audienceRoles": [ "Bioinformaticians" ], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "A l'issue de cette formation, les participants pourront mettre en oeuvre les principes de la science reproductible : encapsuler un environnement de travail (Docker, Singularity), concevoir et exécuter des workflows (Snakemake), gérer des versions de code (Git), passer à l’échelle sur un cluster de calcul (Slurm), gérer des environnements logiciels (Conda) et assurer la traçabilité de leur analyse à l’aide de Notebooks (Jupyter).", "hoursPresentations": 10, "hoursHandsOn": 11, "hoursTotal": 21, "personalised": false, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/568/?format=api" ] }, { "id": 391, "name": "Soumission de données et métadonnées à EMBL-EBI", "shortName": "FAIR Data Geno", "description": "Processus et outils mis en place dans le cadre des projets AgroDiv et BReIF pour soumettre des données dans les archives EMBL-EBI associées à des descriptions riches des échantillons séquencés dans BioSamples.", "homepage": "", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3366", "http://edamontology.org/topic_0219", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "Public", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/813/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/3/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 22, "name": "BReIF", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/BReIF/?format=api" } ], "organisedByOrganisations": [ { "id": 39, "name": "URGI - 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