Training List
Handles creating, reading and updating training events.
GET /api/training/?format=api&offset=200&ordering=-costs
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DNA produced with MiSeq from Illumina and Roche 454 technologies in the Galaxy workbench.\nYou will discover how to use our Galaxy instance, clean reads, clusterize them, do the taxonomic affiliation and perform statistics to interpret your results.\nPrerequisites: knowledge of R or in another programming language\n", "homepage": "http://bioinfo.genotoul.fr/index.php/events/metagenomic-amplicons-and-stats-with…", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "NGS Data Analysis", "Metagenomics", "metatranscriptomics", "Galaxy" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "Subscribe by the web page : http://bioinfo.genotoul.fr/index.php/training-2/galaxy-training/.\nPrices : 165 euros per day for academic people, 550 per day otherwise.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/FROGS_logo_0.png", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/273/?format=api" ] }, { "id": 143, "name": "Training on annotation of transposable elements", "shortName": "", "description": "The objectives of this training are: \nTo acquire knowledge on transposable elements\nTo achieve annotation of transposable elements in the genome using REPET pipelines\nTo be autonomous on your own data.\nProgram\nOpening presentations on transposable elements and their annotation\nStrategies of repeat annotation\nREPET pipelines overview and practices \nPost-analyze tools overview and practices\n \n", "homepage": "https://urgi.versailles.inra.fr/Platform/Training/Training-on-annotation-of-tran…", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "Bioinformatics and Plant Genomics", "Sequence analysis" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "This training is dedicated to biologists and/or bioinformaticians (10 pers. max)\nCost : 150€\nRegistration and information by mail to: urgi-contact@inra.fr\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/272/?format=api" ] }, { "id": 123, "name": "Master Bio-informatique", "shortName": "", "description": "Forme au traitement et à l'analyse des données « à haut débit » (génomique, transcriptomique, protéomique, métabolomique). Cette formation inclus l’acquisition des connaissances fondamentales et des compétences opérationnelles liées à l’interprétation de ce type de données, à travers des enseignements de biologie, bioinformatique, informatique et statistiques appliquées à la Biologie. Elle se caractérise par une formation orientée vers le développement de web services et l’usage de ressources de calcul distribuées.\n \n", "homepage": "", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [], "prerequisites": [ "Master" ], "openTo": "Internal personnel", "accessConditions": "Licence de biologie / lic. 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Organized jointly by the Sigenae and bioinfo genotoul platforms.\n", "homepage": "http://bioinfo.genotoul.fr/index.php/events/reads-alignment-and-small-size-varia…", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "NGS Data Analysis", "Galaxy", "Variant analysis", "Genomics (DNA-seq)", "NGS Sequencing Data Analysis" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "You need to register (via the website) and pay 165 euros a day for academic and 550 euros a day for a private\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [ "https://catalogue.france-bioinformatique.fr/api/event/262/?format=api" ] }, { "id": 71, "name": "Galaxy : first step", "shortName": "", "description": "Galaxy is a workbench available for biologists from Sigenae Platform. Galaxy objectives are:\n First, making bioinfo Linux tools accessible to biologists.\n Then, it is possible to add Linux tools by developpers into Galaxy workbench.\n Then, Galaxy is used to hide the complexity of the infrastructure and to allow creation, execution and sharing of workflows.\nYou will acquire the following competencies required for the other Galaxy trainning:\n Login to Galaxy: Galaxy Workbench (To access to Galaxy, you need to have an LDAP Genotoul login and password).\n Begin to use some tools provided (BWA, SAM tools, FastQC).\n Work on files.\nOrganized jointly by the Sigenae and the Bioinfo Genotoul platform.\n", "homepage": "http://bioinfo.genotoul.fr/index.php/events/first-step-with-galaxy/", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "Web portals", "Galaxy", "Interfaces", "NGS Sequencing Data Analysis" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "You need to register (via the website) and pay 165 euros a day for academic and 550 euros a day for a private.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 67, "name": "RNAseq de novo assembly", "shortName": "", "description": "This training session has been designed to give you an overview of the methods and tools used to de novo assemble transcriptomic short reads. You will learn how to pre-process your raw data (fastq files), how an assembler works and how to use it. Finally you will learn how to assess the quality of your assemblies in order to choose the best one. Organized jointly by the Sigenae and bioinfo genotoul platforms.\n", "homepage": "http://bioinfo.genotoul.fr/index.php/events/rnaseq-de-novo-assembly-2/", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "NGS Data Analysis", "Analysis of RNAseq data", "Transcript and transcript variant analysis", "Transcriptomics (RNA-seq)", "Sequence annotation" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "You need to register (via the website) and pay 165 euros a day for academic and 550 euros a day for a private.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 64, "name": "Read alignment and SNP calling", "shortName": "", "description": "This training session, organized jointly with the Sigenae platform, is designed to help you deal with NGS data, in particular Roche 454 and Illumina Solexa technologies. You will discover the new sequence formats, the new assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection (with the GATK pipeline), polymorphisms annotation and alignment visualization software. Organized jointly by the Sigenae and bioinfo genotoul platforms.\n", "homepage": "http://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-ca…", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [ "NGS Data Analysis", "Variant analysis", "Genomics (DNA-seq)" ], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "You need to register (via the website) and pay 165 euros a day for academic and 550 euros a day for a private.\n", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.812642Z", "audienceTypes": [], "audienceRoles": [], "difficultyLevel": "", "trainingMaterials": [], "learningOutcomes": "", "hoursPresentations": null, "hoursHandsOn": null, "hoursTotal": null, "personalised": null, "event_set": [] }, { "id": 63, "name": "Cluster", "shortName": "", "description": "This training session is designed to help you deal with the platform compute cluster and data banks. 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Ecole de Bioinformatique niveau débutant", "shortName": "EBAII", "description": "Description : La formation EBAII IFB Aviesan de niveau 1 propose une expérience d'apprentissage intensive conçue pour les biologistes, qu'ils soient ingénieurs, doctorants, chercheurs, enseignants-chercheurs ou praticiens, qui sont confrontés à l'analyse de données NGS (Next-Generation Sequencing) mais qui ne disposent pas encore des compétences bioinformatiques nécessaires, ou qui cherchent à renforcer leurs compétences existantes.\r\n\r\nContenu : Cette formation est structurée autour d'une combinaison de sessions théoriques et d'ateliers pratiques. Les participants auront l'occasion d'explorer diverses thématiques, notamment le traitement de données de variants, ChIP-Seq, Bulk RNA-Seq, et Single-Cell RNA-Seq. 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