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"count": 140,
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{
"id": 49,
"uri": "http://edamontology.org/topic_0769",
"label": "Workflows",
"synonyms": [
"Software integration",
"Pipelines",
"Tool interoperability",
"Tool integration"
],
"description": "Biological or biomedical analytical workflows or pipelines."
},
{
"id": 116,
"uri": "http://edamontology.org/topic_3542",
"label": "Protein secondary structure",
"synonyms": [
"Protein super-secondary structure",
"Protein features (secondary structure)"
],
"description": "Secondary structure (predicted or real) of a protein, including super-secondary structure."
},
{
"id": 67,
"uri": "http://edamontology.org/topic_3050",
"label": "Biodiversity",
"synonyms": null,
"description": "The degree of variation of life forms within a given ecosystem, biome or an entire planet."
},
{
"id": 1,
"uri": "http://edamontology.org/topic_3697",
"label": "Microbial ecology",
"synonyms": [
"Molecular community analysis",
"Community analysis",
"Microbiome",
"Environmental microbiology"
],
"description": "The ecology of microorganisms including their relationship with one another and their environment."
},
{
"id": 6,
"uri": "http://edamontology.org/topic_3365",
"label": "Data architecture, analysis and design",
"synonyms": [
"Data analysis",
"Data design",
"Data architecture"
],
"description": "The development of policies, models and standards that cover data acquisition, storage and integration, such that it can be put to use, typically through a process of systematically applying statistical and / or logical techniques to describe, illustrate, summarise or evaluate data."
},
{
"id": 82,
"uri": "http://edamontology.org/topic_0085",
"label": "Functional genomics",
"synonyms": null,
"description": "The study of gene or protein functions and their interactions in totality in a given organism, tissue, cell etc."
},
{
"id": 101,
"uri": "http://edamontology.org/topic_3673",
"label": "Whole genome sequencing",
"synonyms": [
"De novo genome sequencing",
"WGS",
"Genome sequencing",
"Whole genome resequencing"
],
"description": "Laboratory technique to sequence the complete DNA sequence of an organism's genome at a single time."
},
{
"id": 94,
"uri": "http://edamontology.org/topic_3571",
"label": "Data governance",
"synonyms": [
"Data stewardship"
],
"description": "The control of data entry and maintenance to ensure the data meets defined standards, qualities or constraints."
},
{
"id": 122,
"uri": "http://edamontology.org/topic_3360",
"label": "Biomarkers",
"synonyms": [
"Diagnostic markers"
],
"description": "Objective indicators of biological state often used to assess health, and determinate treatment."
},
{
"id": 37,
"uri": "http://edamontology.org/topic_3948",
"label": "Immunoinformatics",
"synonyms": [
"Computational immunology"
],
"description": "Immunoinformatics is the field of computational biology that deals with the study of immunoloogical questions. Immunoinformatics is at the interface between immunology and computer science. It takes advantage of computational, statistical, mathematical approaches and enhances the understanding of immunological knowledge."
},
{
"id": 106,
"uri": "http://edamontology.org/topic_3520",
"label": "Proteomics experiment",
"synonyms": [
"2D PAGE experiment",
"Spectrum demultiplexing",
"Mass spectrometry experiments",
"MS",
"Northern blot experiment",
"MS experiments",
"DIA",
"Mass spectrometry",
"Data-independent acquisition"
],
"description": "Proteomics experiments."
},
{
"id": 121,
"uri": "http://edamontology.org/topic_3343",
"label": "Compound libraries and screening",
"synonyms": [
"Target identification and validation",
"Chemical screening",
"Compound library",
"Chemical library",
"Small compounds libraries",
"Small chemical compounds libraries"
],
"description": "Collections of chemicals, typically for use in high-throughput screening experiments."
},
{
"id": 98,
"uri": "http://edamontology.org/topic_3518",
"label": "Microarray experiment",
"synonyms": [
"miRNA array",
"Proprietary platform micoarray",
"MicroRNA array",
"Gene expression microarray",
"Multichannel microarray",
"RNA microarrays",
"Microarrays",
"mRNA microarray",
"Reverse phase protein array",
"One channel microarray",
"aCGH microarray",
"Tissue microarray",
"SNP array",
"Methylation array",
"Tiling arrays",
"RNA chips",
"Genotyping array",
"Two channel microarray"
],
"description": "Microarray experiments including conditions, protocol, sample:data relationships etc."
},
{
"id": 83,
"uri": "http://edamontology.org/topic_3301",
"label": "Microbiology",
"synonyms": [
"Microbial physiology",
"Microbial genetics",
"Microbiological surveillance",
"Molecular microbiology",
"Medical microbiology",
"Antimicrobial stewardship",
"Microbial surveillance",
"Molecular infection biology"
],
"description": "The biology of microorganisms."
},
{
"id": 41,
"uri": "http://edamontology.org/topic_0157",
"label": "Sequence composition, complexity and repeats",
"synonyms": [
"Protein sequence repeats",
"Sequence complexity",
"Low complexity sequences",
"Nucleic acid repeats",
"Repeat sequences",
"Sequence composition",
"Sequence repeats",
"Protein repeats"
],
"description": "The archival, processing and analysis of the basic character composition of molecular sequences, for example character or word frequency, ambiguity, complexity, particularly regions of low complexity, and repeats or the repetitive nature of molecular sequences."
},
{
"id": 19,
"uri": "http://edamontology.org/topic_3534",
"label": "Protein binding sites",
"synonyms": [
"Protein key folding sites",
"Protein cleavage sites",
"Enzyme active site",
"Protein-nucleic acid binding sites",
"Protein functional sites"
],
"description": "Binding sites in proteins, including cleavage sites (for a proteolytic enzyme or agent), key residues involved in protein folding, catalytic residues (active site) of an enzyme, ligand-binding (non-catalytic) residues of a protein, such as sites that bind metal, prosthetic groups or lipids, RNA and DNA-binding proteins and binding sites etc."
},
{
"id": 47,
"uri": "http://edamontology.org/topic_3382",
"label": "Imaging",
"synonyms": [
"Optical super resolution microscopy",
"Microscopy",
"Photonic force microscopy",
"Photonic microscopy",
"Diffraction experiment",
"Microscopy imaging"
],
"description": "The visual representation of an object."
},
{
"id": 42,
"uri": "http://edamontology.org/topic_3366",
"label": "Data integration and warehousing",
"synonyms": [
"Data integration",
"Data warehousing"
],
"description": "The combination and integration of data from different sources, for example into a central repository or warehouse, to provide users with a unified view of these data."
},
{
"id": 39,
"uri": "http://edamontology.org/topic_0097",
"label": "Nucleic acid structure analysis",
"synonyms": [
"DNA structure",
"Nucleic acid structure",
"Nucleic acid denaturation",
"DNA melting",
"RNA structure alignment",
"RNA structure",
"Nucleic acid thermodynamics",
"RNA alignment"
],
"description": "The archival, curation, processing and analysis of nucleic acid structural information, such as whole structures, structural features and alignments, and associated annotation."
},
{
"id": 103,
"uri": "http://edamontology.org/topic_0659",
"label": "Functional, regulatory and non-coding RNA",
"synonyms": [
"lncRNA",
"Small ncRNA",
"Small interfering RNA",
"Small nuclear RNA",
"siRNA",
"ncRNA",
"snRNA",
"snoRNA",
"Long non-coding RNA",
"Functional RNA",
"piwi-interacting RNA",
"piRNA",
"Long ncRNA",
"microRNA",
"miRNA",
"Small nucleolar RNA",
"Small and long non-coding RNAs",
"Non-coding RNA",
"Small non-coding RNA",
"Regulatory RNA"
],
"description": "Non-coding or functional RNA sequences, including regulatory RNA sequences, ribosomal RNA (rRNA) and transfer RNA (tRNA)."
}
]
}