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"id": 37,
"uri": "http://edamontology.org/topic_3948",
"label": "Immunoinformatics",
"synonyms": [
"Computational immunology"
],
"description": "Immunoinformatics is the field of computational biology that deals with the study of immunoloogical questions. Immunoinformatics is at the interface between immunology and computer science. It takes advantage of computational, statistical, mathematical approaches and enhances the understanding of immunological knowledge."
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"id": 107,
"uri": "http://edamontology.org/topic_3372",
"label": "Software engineering",
"synonyms": [
"Computer programming",
"Algorithms",
"Software development",
"Data structures",
"Programming languages"
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"description": "The process that leads from an original formulation of a computing problem to executable programs."
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"id": 7,
"uri": "http://edamontology.org/topic_3489",
"label": "Database management",
"synonyms": [
"Content management",
"Document, record and content management",
"Record management",
"Data maintenance",
"File management",
"Database administration",
"Document management"
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"description": "The general handling of data stored in digital archives such as databanks, databases proper, web portals and other data resources."
},
{
"id": 6,
"uri": "http://edamontology.org/topic_3365",
"label": "Data architecture, analysis and design",
"synonyms": [
"Data analysis",
"Data design",
"Data architecture"
],
"description": "The development of policies, models and standards that cover data acquisition, storage and integration, such that it can be put to use, typically through a process of systematically applying statistical and / or logical techniques to describe, illustrate, summarise or evaluate data."
},
{
"id": 78,
"uri": "http://edamontology.org/topic_0219",
"label": "Data submission, annotation and curation",
"synonyms": [
"Database curation",
"Data curation",
"Data provenance"
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"description": "Deposition and curation of database accessions, including annotation, typically with terms from a controlled vocabulary."
},
{
"id": 8,
"uri": "http://edamontology.org/topic_3077",
"label": "Data acquisition",
"synonyms": [
"Data collection"
],
"description": "The acquisition of data, typically measurements of physical systems using any type of sampling system, or by another other means."
},
{
"id": 42,
"uri": "http://edamontology.org/topic_3366",
"label": "Data integration and warehousing",
"synonyms": [
"Data integration",
"Data warehousing"
],
"description": "The combination and integration of data from different sources, for example into a central repository or warehouse, to provide users with a unified view of these data."
},
{
"id": 5,
"uri": "http://edamontology.org/topic_3572",
"label": "Data quality management",
"synonyms": [
"Data integrity",
"Data cleaning",
"Data quality",
"Data clean-up"
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"description": "The quality, integrity, and cleaning up of data."
},
{
"id": 87,
"uri": "http://edamontology.org/topic_3071",
"label": "Biological databases",
"synonyms": [
"Data management",
"Databases and information systems",
"Information systems"
],
"description": "The development and use of architectures, policies, practices and procedures for management of data."
},
{
"id": 18,
"uri": "http://edamontology.org/topic_0092",
"label": "Data visualisation",
"synonyms": [
"Data rendering"
],
"description": "Rendering (drawing on a computer screen) or visualisation of molecular sequences, structures or other biomolecular data."
},
{
"id": 94,
"uri": "http://edamontology.org/topic_3571",
"label": "Data governance",
"synonyms": [
"Data stewardship"
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"description": "The control of data entry and maintenance to ensure the data meets defined standards, qualities or constraints."
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{
"id": 101,
"uri": "http://edamontology.org/topic_3673",
"label": "Whole genome sequencing",
"synonyms": [
"De novo genome sequencing",
"WGS",
"Genome sequencing",
"Whole genome resequencing"
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"description": "Laboratory technique to sequence the complete DNA sequence of an organism's genome at a single time."
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{
"id": 57,
"uri": "http://edamontology.org/topic_3064",
"label": "Developmental biology",
"synonyms": [
"Development"
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"description": "How organisms grow and develop."
},
{
"id": 122,
"uri": "http://edamontology.org/topic_3360",
"label": "Biomarkers",
"synonyms": [
"Diagnostic markers"
],
"description": "Objective indicators of biological state often used to assess health, and determinate treatment."
},
{
"id": 27,
"uri": "http://edamontology.org/topic_0203",
"label": "Gene expression",
"synonyms": [
"DNA chips",
"DNA microarrays",
"Gene translation",
"Transcription",
"Expression",
"Gene expression profiling",
"Codon usage",
"Gene transcription"
],
"description": "The analysis of levels and patterns of synthesis of gene products (proteins and functional RNA) including interpretation in functional terms of gene expression data."
},
{
"id": 128,
"uri": "http://edamontology.org/topic_3175",
"label": "Structural variation",
"synonyms": [
"DNA structural variation",
"Genomic structural variation",
"Deletion",
"Duplication",
"Insertion",
"Inversion",
"Translocation"
],
"description": "Variation in chromosome structure including microscopic and submicroscopic types of variation such as deletions, duplications, copy-number variants, insertions, inversions and translocations."
},
{
"id": 39,
"uri": "http://edamontology.org/topic_0097",
"label": "Nucleic acid structure analysis",
"synonyms": [
"DNA structure",
"Nucleic acid structure",
"Nucleic acid denaturation",
"DNA melting",
"RNA structure alignment",
"RNA structure",
"Nucleic acid thermodynamics",
"RNA alignment"
],
"description": "The archival, curation, processing and analysis of nucleic acid structural information, such as whole structures, structural features and alignments, and associated annotation."
},
{
"id": 93,
"uri": "http://edamontology.org/topic_0199",
"label": "Genetic variation",
"synonyms": [
"DNA variation",
"Somatic mutations",
"Genomic variation",
"Mutation",
"Polymorphism"
],
"description": "Stable, naturally occuring mutations in a nucleotide sequence including alleles, naturally occurring mutations such as single base nucleotide substitutions, deletions and insertions, RFLPs and other polymorphisms."
},
{
"id": 85,
"uri": "http://edamontology.org/topic_0610",
"label": "Ecology",
"synonyms": [
"Ecological informatics",
"Ecoinformatics",
"Ecosystem science",
"Computational ecology"
],
"description": "The ecological and environmental sciences and especially the application of information technology (ecoinformatics)."
},
{
"id": 136,
"uri": "http://edamontology.org/topic_3300",
"label": "Physiology",
"synonyms": [
"Electrophysiology"
],
"description": "The functions of living organisms and their constituent parts."
}
]
}