{"count":233,"next":null,"previous":"https://catalogue.france-bioinformatique.fr/api/tool/?format=json&limit=20&offset=200&ordering=maturity","results":[{"id":171,"name":"RNAbrowse","description":"The tool permits sequencing facilities and, even small, bioinformatic teams to give a user-friendly access to RNA-Seq de novo results, helping biologists to analyse and extract meaningful information from their data.","homepage":"https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/ngspipelines/index.php/RNA-seq_denovo","biotoolsID":"rnabrowse","biotoolsCURIE":"biotools:rnabrowse","tool_type":["Web application","Command-line tool"],"collection":[],"scientific_topics":["http://edamontology.org/topic_3170","http://edamontology.org/topic_0099","http://edamontology.org/topic_0219","http://edamontology.org/topic_3168"],"primary_publication":[],"operating_system":["Linux","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":null,"email":null,"url":"https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/ngspipelines/index.php/RNA-seq_denovo","orcidid":null,"gridid":null,"typeEntity":"Person","note":null}],"tool_licence":null,"documentation":"https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/ngspipelines/index.php/RNA-seq_denovo","maturity":null,"cost":null,"unique_visits":2250,"citations":null,"annual_visits":4720,"last_update":"2018-12-10T12:58:51Z","teams":[],"source_repository":null},{"id":2,"name":"FatAndMuscleDB","description":"","homepage":null,"biotoolsID":"","biotoolsCURIE":"","tool_type":["Database portal"],"collection":[],"scientific_topics":[],"primary_publication":[],"operating_system":[],"tool_credit":[],"tool_licence":null,"documentation":null,"maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":null,"teams":[],"source_repository":null},{"id":54,"name":"AphidBase","description":"An aphid genome database.","homepage":"http://aphidbase.com/","biotoolsID":"aphidbase","biotoolsCURIE":"biotools:aphidbase","tool_type":["Database portal"],"collection":[],"scientific_topics":["http://edamontology.org/topic_0622"],"primary_publication":["10.1111/j.1365-2583.2009.00930.x"],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":"BIPAA platform","email":"bipaa@rennes.inra.fr","url":"http://www.inra.fr/bipaa","orcidid":null,"gridid":null,"typeEntity":"Person","note":null},{"type_role":["Provider"],"name":"GenOuest","email":null,"url":null,"orcidid":null,"gridid":null,"typeEntity":"Institute","note":null}],"tool_licence":null,"documentation":"http://bipaa.genouest.org/is/aphidbase/","maturity":null,"cost":"Free of charge","unique_visits":null,"citations":null,"annual_visits":null,"last_update":"2018-12-10T12:58:49Z","teams":["GenOuest"],"source_repository":null},{"id":22,"name":"ProDom protein domain database","description":"A comprehensive set of protein domain families automatically generated from the UniProt Knowledge Database.","homepage":"http://prodom.prabi.fr/prodom/current/html/home.php","biotoolsID":"prodom","biotoolsCURIE":"biotools:prodom","tool_type":["Database portal"],"collection":["DRCAT"],"scientific_topics":["http://edamontology.org/topic_0736","http://edamontology.org/topic_0623"],"primary_publication":["10.1093/nar/28.1.267"],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":null,"email":null,"url":"http://prodom.prabi.fr/prodom/current/html/prodom_team.php","orcidid":null,"gridid":null,"typeEntity":"Person","note":null},{"type_role":["Documentor"],"name":"DRCAT","email":null,"url":null,"orcidid":null,"gridid":null,"typeEntity":"Project","note":null}],"tool_licence":null,"documentation":"http://prodom.prabi.fr/prodom/current/documentation/help.php","maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":"2024-11-25T14:21:05.113834Z","teams":[],"source_repository":null},{"id":16,"name":"dbWFA","description":"","homepage":null,"biotoolsID":"","biotoolsCURIE":"","tool_type":["Database portal"],"collection":[],"scientific_topics":[],"primary_publication":[],"operating_system":[],"tool_credit":[],"tool_licence":null,"documentation":null,"maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":null,"teams":[],"source_repository":null},{"id":180,"name":"Assemble2","description":"Design your RNA 2D structure interactively and to create and assemble the corresponding RNA 3D modules directly in UCSF Chimera.","homepage":"http://bioinformatics.org/assemble/","biotoolsID":"assemble2","biotoolsCURIE":"biotools:assemble2","tool_type":["Web API"],"collection":[],"scientific_topics":["http://edamontology.org/topic_0097"],"primary_publication":["10.1093/bioinformatics/btq321"],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":null,"email":null,"url":"http://www.bioinformatics.org/assemble/contacts.html","orcidid":null,"gridid":null,"typeEntity":"Person","note":null},{"type_role":["Documentor"],"name":"BioCatalogue","email":null,"url":"https://www.biocatalogue.org","orcidid":null,"gridid":null,"typeEntity":"Project","note":null}],"tool_licence":null,"documentation":"http://bioinformatics.org/assemble/","maturity":null,"cost":null,"unique_visits":0,"citations":null,"annual_visits":0,"last_update":"2024-11-25T15:45:38.090886Z","teams":["BiGEst"],"source_repository":null},{"id":136,"name":"AutoGRAPH","description":"Integrated web server for multi-species comparative genomic analysis. It is designed for constructing and visualizing synteny maps between two or three species, determination and display of macrosynteny and microsynteny relationships among species, and for highlighting evolutionary breakpoints.","homepage":"http://autograph.genouest.org/","biotoolsID":"autograph","biotoolsCURIE":"biotools:autograph","tool_type":["Web service"],"collection":[],"scientific_topics":["http://edamontology.org/topic_0797","http://edamontology.org/topic_0654","http://edamontology.org/topic_0102"],"primary_publication":[],"operating_system":[],"tool_credit":[{"type_role":["Primary contact"],"name":"Derrien T","email":"toma.derrien@gmail.com","url":"http://www-recomgen.univ-rennes1.fr/doggy.html","orcidid":null,"gridid":null,"typeEntity":"Person","note":null}],"tool_licence":null,"documentation":"http://autograph.genouest.org/Tutorial.php","maturity":null,"cost":null,"unique_visits":0,"citations":null,"annual_visits":0,"last_update":"2024-11-25T15:04:29.788401Z","teams":["GenOuest"],"source_repository":null},{"id":188,"name":"SyntTax","description":"A web server linking synteny to prokaryotic taxonomy.","homepage":"http://archaea.u-psud.fr/SyntTax/","biotoolsID":"synttax","biotoolsCURIE":"biotools:synttax","tool_type":["Web application"],"collection":[],"scientific_topics":["http://edamontology.org/topic_0204","http://edamontology.org/topic_0637","http://edamontology.org/topic_3053"],"primary_publication":[],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":"Jacques Oberto","email":"jacques.oberto@igmors.u-psud.fr","url":null,"orcidid":null,"gridid":null,"typeEntity":"Person","note":null}],"tool_licence":null,"documentation":"http://archaea.u-psud.fr/SyntTax/SyntTax_Help.html","maturity":null,"cost":null,"unique_visits":1707,"citations":null,"annual_visits":3829,"last_update":"2018-12-10T12:58:58Z","teams":["EBIO"],"source_repository":null},{"id":48,"name":"European Hepatitis C virus database (euHCVdb)","description":"European Hepatitis C virus database.","homepage":"http://euhcvdb.ibcp.fr/euHCVdb/","biotoolsID":"euhcvdb","biotoolsCURIE":"biotools:euhcvdb","tool_type":["Database portal"],"collection":["DRCAT"],"scientific_topics":["http://edamontology.org/topic_0781"],"primary_publication":["10.1093/nar/gkl970"],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":null,"email":null,"url":"https://euhcvdb.ibcp.fr/euHCVdb/jsp/sendMail.jsp","orcidid":null,"gridid":null,"typeEntity":"Person","note":null},{"type_role":["Documentor"],"name":"DRCAT","email":null,"url":null,"orcidid":null,"gridid":null,"typeEntity":"Project","note":null}],"tool_licence":null,"documentation":"https://euhcvdb.ibcp.fr/euHCVdb/jsp/help.jsp","maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":"2024-11-25T16:04:26.299102Z","teams":[],"source_repository":null},{"id":24,"name":"Conjdb","description":"","homepage":null,"biotoolsID":"","biotoolsCURIE":"","tool_type":["Database portal"],"collection":[],"scientific_topics":[],"primary_publication":[],"operating_system":[],"tool_credit":[],"tool_licence":null,"documentation":null,"maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":null,"teams":[],"source_repository":null},{"id":23,"name":"Multi-Genome Genolist","description":"","homepage":null,"biotoolsID":"","biotoolsCURIE":"","tool_type":["Database portal"],"collection":[],"scientific_topics":[],"primary_publication":[],"operating_system":[],"tool_credit":[],"tool_licence":null,"documentation":null,"maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":null,"teams":[],"source_repository":null},{"id":198,"name":"RASTA-Bacteria","description":"Automated method allowing quick and reliable identification of TA loci in sequenced prokaryotic genomes, whether they are annotated open reading frames or not.","homepage":"http://genoweb1.irisa.fr/duals/RASTA-Bacteria/","biotoolsID":"rasta-bacteria","biotoolsCURIE":"biotools:rasta-bacteria","tool_type":["Web application"],"collection":[],"scientific_topics":["http://edamontology.org/topic_3301","http://edamontology.org/topic_0154","http://edamontology.org/topic_0654"],"primary_publication":[],"operating_system":["Linux","Windows","Mac"],"tool_credit":[{"type_role":["Primary contact"],"name":"Frédérique Hubler","email":"fhubler@univ-rennes1.fr","url":null,"orcidid":null,"gridid":null,"typeEntity":"Person","note":null},{"type_role":["Primary contact"],"name":"Emeric Sevin","email":"esevin@ebi.ac.uk","url":null,"orcidid":null,"gridid":null,"typeEntity":"Person","note":null}],"tool_licence":null,"documentation":"http://genoweb1.irisa.fr/duals/RASTA-Bacteria/index.php?page=faq","maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":"2024-11-25T16:14:59.683127Z","teams":["GenOuest"],"source_repository":null},{"id":20,"name":"PRIAM","description":"","homepage":null,"biotoolsID":"","biotoolsCURIE":"","tool_type":["Database portal"],"collection":[],"scientific_topics":[],"primary_publication":[],"operating_system":[],"tool_credit":[],"tool_licence":null,"documentation":null,"maturity":null,"cost":null,"unique_visits":null,"citations":null,"annual_visits":null,"last_update":null,"teams":[],"source_repository":null}]}