GET /api/tool/?format=api&offset=140&ordering=tool_credit
HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "count": 207,
    "next": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=160&ordering=tool_credit",
    "previous": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=120&ordering=tool_credit",
    "results": [
        {
            "id": 89,
            "name": "Workflow4Metabolomics",
            "description": "First fully open-source and collaborative online platform for computational metabolomics. It includes preprocessing, normalization, quality control, statistical analysis of LC/MS, FIA-MS, GC/MS and NMR data.",
            "homepage": "https://workflow4metabolomics.org/",
            "biotoolsID": "workflow4metabolomics",
            "biotoolsCURIE": "biotools:workflow4metabolomics",
            "tool_type": [
                "Bioinformatics portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_3172",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btu813"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "MetaboHUB - National infrastructure in metabolomics & fluxomics",
                    "email": null,
                    "url": "https://www.metabohub.fr/home.html",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Christophe Caron",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Christophe Duperier",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Franck Giacomoni",
                    "email": "franck.giacomoni@inrae.fr",
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": "https://orcid.org/0000-0001-6063-4214",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Gildas Le Corguillé",
                    "email": "lecorguille@sb-roscoff.fr",
                    "url": "http://abims.sb-roscoff.fr",
                    "orcidid": "https://orcid.org/0000-0003-1742-9711",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Marie Tremblay-Franco",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Jean-François Martin",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierrick Roger-Melee",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0001-8177-4873",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Yann Guitton",
                    "email": null,
                    "url": "https://www.laberca.org/plateforme-analytique/presentation/",
                    "orcidid": "https://orcid.org/0000-0002-4479-0636",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Documentor"
                    ],
                    "name": "Cécile Canlet",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Misharl Monsoor",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Etienne A. Thévenot",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0003-1019-4577",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Mélanie Pétéra",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Workflow4Metabolomics Team",
                    "email": "contact@workflow4metabolomics.org",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Marion Landi",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "IFB - Institut Français de Bioinformatique",
                    "email": null,
                    "url": "https://www.france-bioinformatique.fr/en",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierre Pericard",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Alexis Delabrière",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Sophie Goulitquer",
                    "email": null,
                    "url": "http://www.sb-roscoff.fr/en/research-and-training-centre-marine-biology-and-oceanography/services/technological-core-facilities/mass-spectrometry-core-facility",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://workflow4metabolomics.org/howto",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-12-16T14:17:30Z",
            "teams": [
                "ABiMS"
            ],
            "source_repository": "https://github.com/workflow4metabolomics"
        },
        {
            "id": 89,
            "name": "Workflow4Metabolomics",
            "description": "First fully open-source and collaborative online platform for computational metabolomics. It includes preprocessing, normalization, quality control, statistical analysis of LC/MS, FIA-MS, GC/MS and NMR data.",
            "homepage": "https://workflow4metabolomics.org/",
            "biotoolsID": "workflow4metabolomics",
            "biotoolsCURIE": "biotools:workflow4metabolomics",
            "tool_type": [
                "Bioinformatics portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_3172",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btu813"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "MetaboHUB - National infrastructure in metabolomics & fluxomics",
                    "email": null,
                    "url": "https://www.metabohub.fr/home.html",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Christophe Caron",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Christophe Duperier",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Franck Giacomoni",
                    "email": "franck.giacomoni@inrae.fr",
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": "https://orcid.org/0000-0001-6063-4214",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Gildas Le Corguillé",
                    "email": "lecorguille@sb-roscoff.fr",
                    "url": "http://abims.sb-roscoff.fr",
                    "orcidid": "https://orcid.org/0000-0003-1742-9711",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Marie Tremblay-Franco",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Jean-François Martin",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierrick Roger-Melee",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0001-8177-4873",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Yann Guitton",
                    "email": null,
                    "url": "https://www.laberca.org/plateforme-analytique/presentation/",
                    "orcidid": "https://orcid.org/0000-0002-4479-0636",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Documentor"
                    ],
                    "name": "Cécile Canlet",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Misharl Monsoor",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Etienne A. Thévenot",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0003-1019-4577",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Mélanie Pétéra",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Workflow4Metabolomics Team",
                    "email": "contact@workflow4metabolomics.org",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Marion Landi",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "IFB - Institut Français de Bioinformatique",
                    "email": null,
                    "url": "https://www.france-bioinformatique.fr/en",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierre Pericard",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Alexis Delabrière",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Sophie Goulitquer",
                    "email": null,
                    "url": "http://www.sb-roscoff.fr/en/research-and-training-centre-marine-biology-and-oceanography/services/technological-core-facilities/mass-spectrometry-core-facility",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://workflow4metabolomics.org/howto",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-12-16T14:17:30Z",
            "teams": [
                "ABiMS"
            ],
            "source_repository": "https://github.com/workflow4metabolomics"
        },
        {
            "id": 89,
            "name": "Workflow4Metabolomics",
            "description": "First fully open-source and collaborative online platform for computational metabolomics. It includes preprocessing, normalization, quality control, statistical analysis of LC/MS, FIA-MS, GC/MS and NMR data.",
            "homepage": "https://workflow4metabolomics.org/",
            "biotoolsID": "workflow4metabolomics",
            "biotoolsCURIE": "biotools:workflow4metabolomics",
            "tool_type": [
                "Bioinformatics portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_3172",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btu813"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "MetaboHUB - National infrastructure in metabolomics & fluxomics",
                    "email": null,
                    "url": "https://www.metabohub.fr/home.html",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Christophe Caron",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Christophe Duperier",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Franck Giacomoni",
                    "email": "franck.giacomoni@inrae.fr",
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": "https://orcid.org/0000-0001-6063-4214",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Gildas Le Corguillé",
                    "email": "lecorguille@sb-roscoff.fr",
                    "url": "http://abims.sb-roscoff.fr",
                    "orcidid": "https://orcid.org/0000-0003-1742-9711",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Marie Tremblay-Franco",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Jean-François Martin",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierrick Roger-Melee",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0001-8177-4873",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Yann Guitton",
                    "email": null,
                    "url": "https://www.laberca.org/plateforme-analytique/presentation/",
                    "orcidid": "https://orcid.org/0000-0002-4479-0636",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Documentor"
                    ],
                    "name": "Cécile Canlet",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Misharl Monsoor",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Etienne A. Thévenot",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0003-1019-4577",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Mélanie Pétéra",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Workflow4Metabolomics Team",
                    "email": "contact@workflow4metabolomics.org",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Marion Landi",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "IFB - Institut Français de Bioinformatique",
                    "email": null,
                    "url": "https://www.france-bioinformatique.fr/en",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierre Pericard",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Alexis Delabrière",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Sophie Goulitquer",
                    "email": null,
                    "url": "http://www.sb-roscoff.fr/en/research-and-training-centre-marine-biology-and-oceanography/services/technological-core-facilities/mass-spectrometry-core-facility",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://workflow4metabolomics.org/howto",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-12-16T14:17:30Z",
            "teams": [
                "ABiMS"
            ],
            "source_repository": "https://github.com/workflow4metabolomics"
        },
        {
            "id": 89,
            "name": "Workflow4Metabolomics",
            "description": "First fully open-source and collaborative online platform for computational metabolomics. It includes preprocessing, normalization, quality control, statistical analysis of LC/MS, FIA-MS, GC/MS and NMR data.",
            "homepage": "https://workflow4metabolomics.org/",
            "biotoolsID": "workflow4metabolomics",
            "biotoolsCURIE": "biotools:workflow4metabolomics",
            "tool_type": [
                "Bioinformatics portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_3172",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btu813"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "MetaboHUB - National infrastructure in metabolomics & fluxomics",
                    "email": null,
                    "url": "https://www.metabohub.fr/home.html",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Christophe Caron",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Christophe Duperier",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Franck Giacomoni",
                    "email": "franck.giacomoni@inrae.fr",
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": "https://orcid.org/0000-0001-6063-4214",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Gildas Le Corguillé",
                    "email": "lecorguille@sb-roscoff.fr",
                    "url": "http://abims.sb-roscoff.fr",
                    "orcidid": "https://orcid.org/0000-0003-1742-9711",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Marie Tremblay-Franco",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Jean-François Martin",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierrick Roger-Melee",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0001-8177-4873",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Yann Guitton",
                    "email": null,
                    "url": "https://www.laberca.org/plateforme-analytique/presentation/",
                    "orcidid": "https://orcid.org/0000-0002-4479-0636",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Documentor"
                    ],
                    "name": "Cécile Canlet",
                    "email": null,
                    "url": "https://www6.toulouse.inrae.fr/axiomm",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Misharl Monsoor",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Etienne A. Thévenot",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": "https://orcid.org/0000-0003-1019-4577",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Mélanie Pétéra",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Workflow4Metabolomics Team",
                    "email": "contact@workflow4metabolomics.org",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Marion Landi",
                    "email": null,
                    "url": "https://www6.clermont.inrae.fr/unh/Plateaux-Techniques/Metabolisme-et-Spectrometrie-de-Masse",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "IFB - Institut Français de Bioinformatique",
                    "email": null,
                    "url": "https://www.france-bioinformatique.fr/en",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierre Pericard",
                    "email": null,
                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Alexis Delabrière",
                    "email": null,
                    "url": "http://www-list.cea.fr/index.php/en/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Sophie Goulitquer",
                    "email": null,
                    "url": "http://www.sb-roscoff.fr/en/research-and-training-centre-marine-biology-and-oceanography/services/technological-core-facilities/mass-spectrometry-core-facility",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://workflow4metabolomics.org/howto",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-12-16T14:17:30Z",
            "teams": [
                "ABiMS"
            ],
            "source_repository": "https://github.com/workflow4metabolomics"
        },
        {
            "id": 90,
            "name": "FAIDARE",
            "description": "FAIDARE: FAIR Data-finder for Agronomic Research. \nThe purpose of this portal is to facilitate the discoverability of public data on plant biology from a federation of established data repositories.\n\nIt is based on the Breeding API (BrAPI) specifications and facilitates the access to genotype and phenotype datasets for crop and forest plants through an easy to use web interface. It also provides a standard interface that can be accessed programatically through web services.\n\nIt is an extension of the generic DataDiscovery portal, a web portal that allows finding any type of data across several databases through a lightweight keyword based search. FAIDARE offers more detailed search and data retrieval capabilities and it takes advantage of the growing adoption of the BrAPI.",
            "homepage": "https://urgi.versailles.inrae.fr/faidare/",
            "biotoolsID": "faidare",
            "biotoolsCURIE": "biotools:faidare",
            "tool_type": [
                "Database portal",
                "Web service",
                "Web API",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "URGI"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0780",
                "http://edamontology.org/topic_0625",
                "http://edamontology.org/topic_3810",
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3071",
                "http://edamontology.org/topic_0091"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Support",
                        "Primary contact"
                    ],
                    "name": "URGI support",
                    "email": "urgi-support@inrae.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": "BSD-3-Clause",
            "documentation": "https://urgi.versailles.inrae.fr/faidare/help",
            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-09-02T05:04:34.812991Z",
            "teams": [
                "PlantBioinfoPF"
            ],
            "source_repository": "https://forgemia.inra.fr/urgi-is/faidare"
        },
        {
            "id": 91,
            "name": "DataDiscovery",
            "description": "DataDiscovery aims at providing researchers a simple and fast access to relevant biological data using specific keywords and easy to use filters.\n\nThis tool is expected to be easily customizable for specific filters, environments, or data schemas. Its current implementations supported by URGI are: WheatIS, Plant, RARe.",
            "homepage": "https://urgi.versailles.inrae.fr/data-discovery/",
            "biotoolsID": "DataDiscovery",
            "biotoolsCURIE": "biotools:DataDiscovery",
            "tool_type": [
                "Database portal",
                "Web service",
                "Web API",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "URGI",
                "FR"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0780",
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3071",
                "http://edamontology.org/topic_0091",
                "http://edamontology.org/topic_3810"
            ],
            "primary_publication": [
                "10.3835/plantgenome2015.06.0038"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Support",
                        "Primary contact"
                    ],
                    "name": "urgi-support",
                    "email": "urgi-support@inrae.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": "BSD-3-Clause",
            "documentation": "https://forgemia.inra.fr/urgi-is/data-discovery/blob/master/HELP.md",
            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-09-06T15:57:35.550435Z",
            "teams": [
                "PlantBioinfoPF"
            ],
            "source_repository": "https://forgemia.inra.fr/urgi-is/data-discovery"
        },
        {
            "id": 93,
            "name": "MicroScope platform",
            "description": "MicroScope is an integrated Web platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis. It supports submissions of newly assembled genomes and metagenomes, and also provides analysis services for RNA-seq data. The user interface of MicroScope enables collaborative work in a rich comparative context to improve community-based curation efforts.",
            "homepage": "https://mage.genoscope.cns.fr/microscope/",
            "biotoolsID": "MicroScope_platform",
            "biotoolsCURIE": "biotools:MicroScope_platform",
            "tool_type": [
                "Bioinformatics portal",
                "Web application",
                "Workbench"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "fr"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3301",
                "http://edamontology.org/topic_0085",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_0219"
            ],
            "primary_publication": [
                "10.1093/nar/gks1194",
                "10.1093/nar/gkz926",
                "10.1093/database/bap021",
                "10.1093/nar/gkj406",
                "10.1093/nar/gkw1101",
                "10.1093/bib/bbx113"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support",
                        "Developer",
                        "Provider",
                        "Primary contact"
                    ],
                    "name": "LABGeM - CEA/Genosocope - UMR8030",
                    "email": "labgem@genoscope.cns.fr",
                    "url": "https://labgem.genoscope.cns.fr",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://microscope.readthedocs.io/en/stable/",
            "maturity": "Mature",
            "cost": "Free of charge (with restrictions)",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:28Z",
            "teams": [
                "MicroScope"
            ],
            "source_repository": null
        },
        {
            "id": 94,
            "name": "VarAFT",
            "description": "VarAFT (Variant Analysis and Filtration Tool) is a standalone and multiplatform tool for annotation and prioritization of potential disease causing genes. With this tool users can annotate variant (VCF) files, combine multiple samples from various individuals, prioritize list of variants by multi-filtering parameters. Additionally, users can perform a coverage analysis and quality check from any BAM file.",
            "homepage": "http://varaft.eu",
            "biotoolsID": "varaft",
            "biotoolsCURIE": "biotools:varaft",
            "tool_type": [
                "Desktop application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "Developed_RD-Connect",
                "RD-Connect",
                "Rare Disease",
                "ELIXIR-FR"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3053",
                "http://edamontology.org/topic_0625",
                "http://edamontology.org/topic_3063",
                "http://edamontology.org/topic_3325"
            ],
            "primary_publication": [
                "10.1093/nar/gky471"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Contact form",
                    "email": null,
                    "url": "http://varaft.eu/#contact",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Jean-Pierre Desvignes",
                    "email": "jean-pierre.desvignes@univ-amu.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "David Salgado",
                    "email": "david.salgado@univ-amu.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": "Other",
            "documentation": "http://varaft.eu/download_files/VarAFT_Documentation_V2.pdf",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-04-02T21:35:23.173094Z",
            "teams": [
                "MMG-GBIT"
            ],
            "source_repository": null
        },
        {
            "id": 94,
            "name": "VarAFT",
            "description": "VarAFT (Variant Analysis and Filtration Tool) is a standalone and multiplatform tool for annotation and prioritization of potential disease causing genes. With this tool users can annotate variant (VCF) files, combine multiple samples from various individuals, prioritize list of variants by multi-filtering parameters. Additionally, users can perform a coverage analysis and quality check from any BAM file.",
            "homepage": "http://varaft.eu",
            "biotoolsID": "varaft",
            "biotoolsCURIE": "biotools:varaft",
            "tool_type": [
                "Desktop application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "Developed_RD-Connect",
                "RD-Connect",
                "Rare Disease",
                "ELIXIR-FR"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3053",
                "http://edamontology.org/topic_0625",
                "http://edamontology.org/topic_3063",
                "http://edamontology.org/topic_3325"
            ],
            "primary_publication": [
                "10.1093/nar/gky471"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Contact form",
                    "email": null,
                    "url": "http://varaft.eu/#contact",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Jean-Pierre Desvignes",
                    "email": "jean-pierre.desvignes@univ-amu.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "David Salgado",
                    "email": "david.salgado@univ-amu.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": "Other",
            "documentation": "http://varaft.eu/download_files/VarAFT_Documentation_V2.pdf",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-04-02T21:35:23.173094Z",
            "teams": [
                "MMG-GBIT"
            ],
            "source_repository": null
        },
        {
            "id": 95,
            "name": "RSAT oligo-analysis",
            "description": "Compute k-mer frequencies (oligonucleotides or oligopeptides) and various statistics to discover exceptional motifs (over-represented or under-represented). Typical applications include discovery of transcription factor binding motifs, restriction sites in bacterial genomes, RNA termination and polyadenylation signals, detection of motifs associated with replication origins, analysis of oligopeptide frequencies in protein sequences.",
            "homepage": "http://teaching.rsat.eu/oligo-analysis_form.cgi",
            "biotoolsID": "oligo-analysis",
            "biotoolsCURIE": "biotools:oligo-analysis",
            "tool_type": [
                "Web service",
                "Web application",
                "Command-line tool"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "FR",
                "Regulatory Sequence Analysis Tools (RSAT)"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0749",
                "http://edamontology.org/topic_3510",
                "http://edamontology.org/topic_0204",
                "http://edamontology.org/topic_3511"
            ],
            "primary_publication": [
                "10.1006/jmbi.1998.1947"
            ],
            "operating_system": [
                "Linux",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "RSAT",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": "AFL-3.0",
            "documentation": "http://rsat.eu/",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:23.505699Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 95,
            "name": "RSAT oligo-analysis",
            "description": "Compute k-mer frequencies (oligonucleotides or oligopeptides) and various statistics to discover exceptional motifs (over-represented or under-represented). Typical applications include discovery of transcription factor binding motifs, restriction sites in bacterial genomes, RNA termination and polyadenylation signals, detection of motifs associated with replication origins, analysis of oligopeptide frequencies in protein sequences.",
            "homepage": "http://teaching.rsat.eu/oligo-analysis_form.cgi",
            "biotoolsID": "oligo-analysis",
            "biotoolsCURIE": "biotools:oligo-analysis",
            "tool_type": [
                "Web service",
                "Web application",
                "Command-line tool"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "FR",
                "Regulatory Sequence Analysis Tools (RSAT)"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0749",
                "http://edamontology.org/topic_3510",
                "http://edamontology.org/topic_0204",
                "http://edamontology.org/topic_3511"
            ],
            "primary_publication": [
                "10.1006/jmbi.1998.1947"
            ],
            "operating_system": [
                "Linux",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "RSAT",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": "AFL-3.0",
            "documentation": "http://rsat.eu/",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:23.505699Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 95,
            "name": "RSAT oligo-analysis",
            "description": "Compute k-mer frequencies (oligonucleotides or oligopeptides) and various statistics to discover exceptional motifs (over-represented or under-represented). Typical applications include discovery of transcription factor binding motifs, restriction sites in bacterial genomes, RNA termination and polyadenylation signals, detection of motifs associated with replication origins, analysis of oligopeptide frequencies in protein sequences.",
            "homepage": "http://teaching.rsat.eu/oligo-analysis_form.cgi",
            "biotoolsID": "oligo-analysis",
            "biotoolsCURIE": "biotools:oligo-analysis",
            "tool_type": [
                "Web service",
                "Web application",
                "Command-line tool"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "FR",
                "Regulatory Sequence Analysis Tools (RSAT)"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0749",
                "http://edamontology.org/topic_3510",
                "http://edamontology.org/topic_0204",
                "http://edamontology.org/topic_3511"
            ],
            "primary_publication": [
                "10.1006/jmbi.1998.1947"
            ],
            "operating_system": [
                "Linux",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "RSAT",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Jacques van Helden",
                    "email": "Jacques.van-Helden@univ-amu.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-8799-8584",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": "AFL-3.0",
            "documentation": "http://rsat.eu/",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:23.505699Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 96,
            "name": "GINsim",
            "description": "Computer tool for the modeling and simulation of genetic regulatory networks.",
            "homepage": "http://ginsim.org/",
            "biotoolsID": "ginsim",
            "biotoolsCURIE": "biotools:ginsim",
            "tool_type": [
                "Desktop application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "FR",
                "EBI Training Tools",
                "PerMedCoE"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_0602",
                "http://edamontology.org/topic_0204"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Support",
                        "Developer"
                    ],
                    "name": null,
                    "email": null,
                    "url": "http://ginsim.org/contact",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                }
            ],
            "tool_licence": "GPL-3.0",
            "documentation": "http://ginsim.org/documentation",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:09:51.625867Z",
            "teams": [],
            "source_repository": "http://ginsim.org/models_repository"
        },
        {
            "id": 97,
            "name": "Ocean Gene Atlas",
            "description": "The Ocean Gene Atlas service provides data mining access to three complementary data objects: gene sequence catalogs (ENA), sample environmental context (PANGAEA), and gene abundances estimates in samples (computed by mapping sequence reads onto gene catalogs).\nUser queries are composed of either a sequence (nucleic or protein), or a hidden Markov model derived from a multiple sequence alignment. Homologs of the user query in the gene catalogs are identified using standard sequence similarity search tools (eg BLAST or HMMER), and their read based estimated abundance are displayed in interactive maps and plots. A phylogenetic tree is also inferred in order to situate the user query within its context of marine environmental homologs as well as known homologs from reference sequences.",
            "homepage": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/",
            "biotoolsID": "Ocean_Gene_Atlas",
            "biotoolsCURIE": "biotools:Ocean_Gene_Atlas",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3387",
                "http://edamontology.org/topic_3174",
                "http://edamontology.org/topic_3941"
            ],
            "primary_publication": [
                "10.1093/nar/gky376"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "oceangeneatlas@mio.osupytheas.fr",
                    "url": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/credits",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "MIO",
                    "email": null,
                    "url": "https://www.mio.osupytheas.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "OCEANOMICS",
                    "email": null,
                    "url": "http://www.oceanomics.eu/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Funding agency",
                    "note": "ANR-11-BTBR-0008"
                }
            ],
            "tool_licence": "Not licensed",
            "documentation": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/build/pdf/Ocean-Gene-Atlas_User_Manual.pdf",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:34.208631Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 97,
            "name": "Ocean Gene Atlas",
            "description": "The Ocean Gene Atlas service provides data mining access to three complementary data objects: gene sequence catalogs (ENA), sample environmental context (PANGAEA), and gene abundances estimates in samples (computed by mapping sequence reads onto gene catalogs).\nUser queries are composed of either a sequence (nucleic or protein), or a hidden Markov model derived from a multiple sequence alignment. Homologs of the user query in the gene catalogs are identified using standard sequence similarity search tools (eg BLAST or HMMER), and their read based estimated abundance are displayed in interactive maps and plots. A phylogenetic tree is also inferred in order to situate the user query within its context of marine environmental homologs as well as known homologs from reference sequences.",
            "homepage": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/",
            "biotoolsID": "Ocean_Gene_Atlas",
            "biotoolsCURIE": "biotools:Ocean_Gene_Atlas",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3387",
                "http://edamontology.org/topic_3174",
                "http://edamontology.org/topic_3941"
            ],
            "primary_publication": [
                "10.1093/nar/gky376"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "oceangeneatlas@mio.osupytheas.fr",
                    "url": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/credits",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "MIO",
                    "email": null,
                    "url": "https://www.mio.osupytheas.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "OCEANOMICS",
                    "email": null,
                    "url": "http://www.oceanomics.eu/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Funding agency",
                    "note": "ANR-11-BTBR-0008"
                }
            ],
            "tool_licence": "Not licensed",
            "documentation": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/build/pdf/Ocean-Gene-Atlas_User_Manual.pdf",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:34.208631Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 97,
            "name": "Ocean Gene Atlas",
            "description": "The Ocean Gene Atlas service provides data mining access to three complementary data objects: gene sequence catalogs (ENA), sample environmental context (PANGAEA), and gene abundances estimates in samples (computed by mapping sequence reads onto gene catalogs).\nUser queries are composed of either a sequence (nucleic or protein), or a hidden Markov model derived from a multiple sequence alignment. Homologs of the user query in the gene catalogs are identified using standard sequence similarity search tools (eg BLAST or HMMER), and their read based estimated abundance are displayed in interactive maps and plots. A phylogenetic tree is also inferred in order to situate the user query within its context of marine environmental homologs as well as known homologs from reference sequences.",
            "homepage": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/",
            "biotoolsID": "Ocean_Gene_Atlas",
            "biotoolsCURIE": "biotools:Ocean_Gene_Atlas",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3387",
                "http://edamontology.org/topic_3174",
                "http://edamontology.org/topic_3941"
            ],
            "primary_publication": [
                "10.1093/nar/gky376"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "oceangeneatlas@mio.osupytheas.fr",
                    "url": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/credits",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "MIO",
                    "email": null,
                    "url": "https://www.mio.osupytheas.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "OCEANOMICS",
                    "email": null,
                    "url": "http://www.oceanomics.eu/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Funding agency",
                    "note": "ANR-11-BTBR-0008"
                }
            ],
            "tool_licence": "Not licensed",
            "documentation": "http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/build/pdf/Ocean-Gene-Atlas_User_Manual.pdf",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:59:34.208631Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 107,
            "name": "GENOMICUS",
            "description": "Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus/",
            "biotoolsID": "GENOMICUS",
            "biotoolsCURIE": "biotools:GENOMICUS",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0623",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0622"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btq079",
                "10.1093/nar/gkab1091"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "IBENS - DYOGEN Team",
                    "email": null,
                    "url": "http://www.ibens.ens.fr/?rubrique43&lang=en",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "PB-IBENS",
                    "email": null,
                    "url": "https://www.ibens.ens.fr/?rubrique55",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://www.youtube.com/watch?v=CokUh3fUbGQ",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2023-03-06T14:10:23.175189Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 101,
            "name": "Genomicus-plants",
            "description": "Genomicus-Plants is a genome browser that enables users to navigate in plants genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "https://www.genomicus.biologie.ens.fr/genomicus-plants",
            "biotoolsID": "Genomicus-Plants",
            "biotoolsCURIE": "biotools:Genomicus-Plants",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0623",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0622",
                "http://edamontology.org/topic_0780"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156",
                "10.1093/pcp/pcu177"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 98,
            "name": "Genomicus-metazoa",
            "description": "Genomicus-metazoa is a genome browser that enables users to navigate in metazoa genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus-metazoa/",
            "biotoolsID": "Genomicus-metazoa",
            "biotoolsCURIE": "biotools:Genomicus-metazoa",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0623",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0622"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T14:56:24.333237Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 100,
            "name": "Genomicus-fungi",
            "description": "Genomicus-fungi is a genome browser that enables users to navigate in fungi genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus-fungi/",
            "biotoolsID": "Genomicus-fungi",
            "biotoolsCURIE": "biotools:Genomicus-fungi",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0623",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0622"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        }
    ]
}