GET /api/tool/?format=api&offset=140&ordering=-teams
HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "count": 233,
    "next": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=160&ordering=-teams",
    "previous": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=120&ordering=-teams",
    "results": [
        {
            "id": 5,
            "name": "AgroLD",
            "description": "The RDF Knowledge-based Database for plant molecular networks.",
            "homepage": "http://agrold.southgreen.fr/agrold/",
            "biotoolsID": "AgroLD",
            "biotoolsCURIE": "biotools:AgroLD",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0602",
                "http://edamontology.org/topic_3810"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2019-11-05T14:52:28Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 264,
            "name": "PanExplorer",
            "description": "A web-based tool for exploratory analysis and visualization of bacterial pan-genomes.",
            "homepage": "http://panexplorer.southgreen.fr",
            "biotoolsID": "panexplorer",
            "biotoolsCURIE": "biotools:panexplorer",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3382",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_3175"
            ],
            "primary_publication": [],
            "operating_system": [
                "Mac",
                "Linux",
                "Windows"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "Alexis Dereeper",
                    "email": "alexis.dereeper@ird.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-8120-8409",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Damien F Meyer",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Marilyne Summo",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T15:26:52.796766Z",
            "teams": [
                "South Green"
            ],
            "source_repository": "https://github.com/SouthGreenPlatform/PanExplorer"
        },
        {
            "id": 3,
            "name": "Rice Genome Hub",
            "description": "An open source database(s) for genetics, genomics and functional research in rice species",
            "homepage": "https://rice-genome-hub.southgreen.fr/",
            "biotoolsID": "Rice_Genome_Hub",
            "biotoolsCURIE": "biotools:Rice_Genome_Hub",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "Genome Hub",
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3321",
                "http://edamontology.org/topic_3366",
                "http://edamontology.org/topic_0780"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "gaetan.droc@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-1849-1269",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "manuel.ruiz@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-8153-276X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "christine.tranchant@ird.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-6934-1215",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "CRP Rice",
                    "email": null,
                    "url": "http://ricecrp.org/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Funding agency",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 125,
            "name": "Gigwa",
            "description": "The Gigwa application, which stands for “Genotype Investigator for Genome-Wide Analyses”, provides an easy and intuitive way to explore large amounts of genotyping data by filtering it not only on the basis of variant features, including functional annotations, but also matching genotype patterns. It is a fairly lightweight, web-based, platform-independent solution that may be deployed on a workstation or as a data portal. It allows to feed a MongoDB database with VCF, PLINK or HapMap files containing up to tens of billions of genotypes, and provides a user-friendly interface to filter data in real time. Gigwa provides the means to export filtered data into several popular formats and features connectivity not only with online genomic tools, but also with standalone software such as FlapJack or IGV. Additionnally, Gigwa-hosted datasets are interoperable via two standard REST APIs: GA4GH and BrAPI.",
            "homepage": "http://www.southgreen.fr/content/gigwa",
            "biotoolsID": "Gigwa",
            "biotoolsCURIE": "biotools:Gigwa",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0625",
                "http://edamontology.org/topic_2885",
                "http://edamontology.org/topic_3071"
            ],
            "primary_publication": [
                "10.1093/GIGASCIENCE/GIZ051",
                "10.1186/s13742-016-0131-8"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Guilhem Sempéré",
                    "email": "guilhem.sempere@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-7429-2091",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "gigwa@cirad.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": "AGPL-3.0",
            "documentation": "http://gigwa.southgreen.fr/gigwa/docs/gigwa_docs.html",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2020-09-14T08:25:17Z",
            "teams": [
                "South Green"
            ],
            "source_repository": "https://github.com/SouthGreenPlatform/Gigwa2"
        },
        {
            "id": 263,
            "name": "TrEMOLO",
            "description": "Accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches.",
            "homepage": "https://github.com/DrosophilaGenomeEvolution/TrEMOLO",
            "biotoolsID": "tremolo",
            "biotoolsCURIE": "biotools:tremolo",
            "tool_type": [
                "Workflow",
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0798",
                "http://edamontology.org/topic_0196",
                "http://edamontology.org/topic_3168",
                "http://edamontology.org/topic_3175"
            ],
            "primary_publication": [
                "10.1186/s13059-023-02911-2"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "Anna-Sophie Fiston-Lavier",
                    "email": "anna-sophie.fiston-lavier@umontpellier.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-7306-6532",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Séverine Chambeyron",
                    "email": "severine.chambeyron@igh.cnrs.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-2775-6556",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T14:41:13.039486Z",
            "teams": [
                "South Green"
            ],
            "source_repository": "https://dataverse.ird.fr/dataverse/tremolo_data"
        },
        {
            "id": 262,
            "name": "GeMo",
            "description": "A web-based platform for the visualization and curation of genome ancestry mosaics.",
            "homepage": "https://gemo.southgreen.fr/",
            "biotoolsID": "gemo",
            "biotoolsCURIE": "biotools:gemo",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0654",
                "http://edamontology.org/topic_0625",
                "http://edamontology.org/topic_3810",
                "http://edamontology.org/topic_0780",
                "http://edamontology.org/topic_3500"
            ],
            "primary_publication": [],
            "operating_system": [
                "Mac",
                "Linux",
                "Windows"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Mathieu Rouard",
                    "email": "m.rouard@cgiar.org",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-0284-1885",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Marilyne Summo",
                    "email": "marilyne.summo@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-9308-974X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Gaëtan Droc",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-1849-1269",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "Guillaume Martin",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-1801-7500",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://gemo.readthedocs.io",
            "maturity": null,
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T15:31:16.942311Z",
            "teams": [
                "South Green"
            ],
            "source_repository": "https://github.com/SouthGreenPlatform/GeMo"
        },
        {
            "id": 261,
            "name": "Panache",
            "description": "Panache (Pangenome analyzer with chromosomal exploration) is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show aresence/absence information of pangenomic blocks of sequence or genes in a browser-like display.",
            "homepage": "http://github.com/SouthGreenPlatform/panache",
            "biotoolsID": "panache",
            "biotoolsCURIE": "biotools:panache",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0654",
                "http://edamontology.org/topic_0621"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/btab688"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Mathieu Rouard",
                    "email": "m.rouard@cgiar.org",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-0284-1885",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Éloi Durant",
                    "email": "eloi.durant@ird.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-2734-4327",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2021-11-01T10:14:54.337479Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 37,
            "name": "GreenPhyl",
            "description": "",
            "homepage": null,
            "biotoolsID": "",
            "biotoolsCURIE": "",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": null,
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 260,
            "name": "CulebrONT",
            "description": "CulebrONT is a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes.",
            "homepage": "https://github.com/SouthGreenPlatform/CulebrONT_pipeline",
            "biotoolsID": "culebront",
            "biotoolsCURIE": "biotools:culebront",
            "tool_type": [
                "Workflow"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0196",
                "http://edamontology.org/topic_0769",
                "http://edamontology.org/topic_0621"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2022-01-10T14:00:06.343876Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 6,
            "name": "SNiPlay",
            "description": "",
            "homepage": null,
            "biotoolsID": "",
            "biotoolsCURIE": "",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": null,
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 124,
            "name": "TOGGLE",
            "description": "Toolbox for generic NGS analyses.",
            "homepage": "https://github.com/SouthGreenPlatform/TOGGLE",
            "biotoolsID": "toggle",
            "biotoolsCURIE": "biotools:toggle",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3168",
                "http://edamontology.org/topic_0080"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Support",
                    "email": "toggle@ird.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://github.com/SouthGreenPlatform/TOGGLE",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2018-12-10T12:58:58Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 120,
            "name": "Cocoa Genome Hub",
            "description": "The Cocoa Genome Hub is an integrated web-based database providing centralized access to the cocoa reference genome sequences and genomic resources.",
            "homepage": "https://cocoa-genome-hub.southgreen.fr/",
            "biotoolsID": "Cocoa_Genome_Hub",
            "biotoolsCURIE": "biotools:Cocoa_Genome_Hub",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "Genome Hub",
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_3308",
                "http://edamontology.org/topic_3810",
                "http://edamontology.org/topic_0203"
            ],
            "primary_publication": [
                "10.1186/s12864-017-4120-9"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Droc",
                    "email": "gaetan.droc@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0003-1849-1269",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Lanaud",
                    "email": "claire.lanaud@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-6411-7310",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Maintainer"
                    ],
                    "name": "CIRAD",
                    "email": null,
                    "url": "https://www.cirad.fr",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [],
                    "name": "ANR",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Funding agency",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Argout",
                    "email": "xavier.argout@cirad.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-0100-5511",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": "GPL-2.0",
            "documentation": "http://api.tripal.info/api/tripal/3.x",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-25T14:00:43.154205Z",
            "teams": [
                "South Green"
            ],
            "source_repository": null
        },
        {
            "id": 83,
            "name": "Phylogeny.fr",
            "description": "Free, simple to use web service dedicated to reconstructing and analysing phylogenetic relationships between molecular sequences.",
            "homepage": "http://www.phylogeny.fr/",
            "biotoolsID": "phylogeny.fr",
            "biotoolsCURIE": "biotools:phylogeny.fr",
            "tool_type": [
                "Web application",
                "Workbench"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3293"
            ],
            "primary_publication": [
                "10.1093/nar/gkn180"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "LIRMM",
                    "email": null,
                    "url": "http://www.lirmm.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": null,
                    "url": "http://www.phylogeny.fr/contacts.cgi",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "IGS",
                    "email": null,
                    "url": "http://www.igs.cnrs-mrs.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Alexis Dereeper",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Valentin Guignon",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://www.phylogeny.fr/documentation.cgi",
            "maturity": "Legacy",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:33:44.667229Z",
            "teams": [
                "ATGC",
                "PACA-Bioinfo"
            ],
            "source_repository": null
        },
        {
            "id": 239,
            "name": "ACDtool",
            "description": "Web-server for the generic analysis of large data sets of counts.",
            "homepage": "https://www.igs.cnrs-mrs.fr/acdtool/",
            "biotoolsID": "acdtool",
            "biotoolsCURIE": "biotools:acdtool",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_2269"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2025-12-10T09:25:24.490675Z",
            "teams": [
                "PACA-Bioinfo"
            ],
            "source_repository": null
        },
        {
            "id": 247,
            "name": "metagWGS",
            "description": "metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.",
            "homepage": "https://forgemia.inra.fr/genotoul-bioinfo/metagwgs",
            "biotoolsID": "metagwgs",
            "biotoolsCURIE": "biotools:metagwgs",
            "tool_type": [
                "Workflow"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3391",
                "http://edamontology.org/topic_3174"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Claire Hoede",
                    "email": "claire.hoede@inrae.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-5054-7731",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "GenoToul bioinformatics facility",
                    "email": null,
                    "url": "http://bioinfo.genotoul.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Division",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://genotoul-bioinfo.pages-forge.inrae.fr/metagwgs/master/index.html",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2025-12-11T14:51:44.804907Z",
            "teams": [
                "Genotoul-bioinfo"
            ],
            "source_repository": "https://forge.inrae.fr/genotoul-bioinfo/metagwgs"
        },
        {
            "id": 142,
            "name": "SeaView",
            "description": "Multiplatform graphical user interface designed to facilitate alignment and phylogenic tree building from molecular sequences.",
            "homepage": "http://doua.prabi.fr/software/seaview",
            "biotoolsID": "seaview",
            "biotoolsCURIE": "biotools:seaview",
            "tool_type": [
                "Command-line tool",
                "Desktop application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0092",
                "http://edamontology.org/topic_0080",
                "http://edamontology.org/topic_0084"
            ],
            "primary_publication": [
                "10.1093/molbev/msp259"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "IFB ELIXIR-FR",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Manolo Gouy",
                    "email": "mgouy@biomserv.uni-lyon1.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://doua.prabi.fr/main/index",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2024-11-25T15:49:59.006607Z",
            "teams": [
                "PRABI-Lyon-Grenoble"
            ],
            "source_repository": null
        },
        {
            "id": 143,
            "name": "leBIBI",
            "description": "Quick bioInformatic phylogeny of prokaryotes.",
            "homepage": "https://umr5558-bibiserv.univ-lyon1.fr/lebibi/lebibi.cgi",
            "biotoolsID": "leBIBI",
            "biotoolsCURIE": "biotools:leBIBI",
            "tool_type": [],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0084"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 154145,
            "last_update": "2019-11-06T11:33:13Z",
            "teams": [
                "PRABI-Lyon-Grenoble"
            ],
            "source_repository": null
        },
        {
            "id": 1,
            "name": "VirHostnet",
            "description": "Virus-Host Network is a knowledge-base system dedicated to the curation, the integration, the management and the analysis of virus-host molecular (mainly protein-protein) interaction networks as well as their functional annotation (molecular functions, cellular pathways, protein domains). VirHostNet contains high quality and up-to-date information gathered and curated from public databases.",
            "homepage": "http://virhostnet.prabi.fr/",
            "biotoolsID": "virhostnet",
            "biotoolsCURIE": "biotools:virhostnet",
            "tool_type": [
                "Database portal",
                "Bioinformatics portal",
                "Web service"
            ],
            "collection": [
                "COVID-19",
                "PRABI"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0781",
                "http://edamontology.org/topic_0602",
                "http://edamontology.org/topic_3957",
                "http://edamontology.org/topic_0128",
                "http://edamontology.org/topic_3324"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "VirHostNet Support",
                    "email": "vincent.navratil@univ-lyon1.fr",
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-9974-1877",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": "Head of the prabi-amsb bioinformatics core facility (http://amsb.prabi.fr)"
                }
            ],
            "tool_licence": "Not licensed",
            "documentation": "https://pbil.univ-lyon1.fr/redmine/projects/virhostscape/wiki",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-12-08T10:41:55Z",
            "teams": [
                "PRABI-AMSB"
            ],
            "source_repository": null
        },
        {
            "id": 280,
            "name": "Paraload",
            "description": "Paraload is an original utility which ensures job distribution between thousands of processors, according to the type of the data to be analysed.",
            "homepage": "ftp://doua.prabi.fr/pub/logiciel/paraload",
            "biotoolsID": "Paraload",
            "biotoolsCURIE": "biotools:Paraload",
            "tool_type": [],
            "collection": [],
            "scientific_topics": [],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2019-11-06T12:00:30Z",
            "teams": [
                "PRABI-AMSB"
            ],
            "source_repository": null
        },
        {
            "id": 205,
            "name": "DiscoSNP",
            "description": "This software is designed for discovering Single Nucleotide Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation Sequencers (NGS).",
            "homepage": "https://colibread.inria.fr/software/discosnp/",
            "biotoolsID": "discosnp",
            "biotoolsCURIE": "biotools:discosnp",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [
                "GATB"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2885",
                "http://edamontology.org/topic_3168",
                "http://edamontology.org/topic_3053",
                "http://edamontology.org/topic_0199"
            ],
            "primary_publication": [
                "10.1093/nar/gku1187"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "GenOuest",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Pierre Peterlongo",
                    "email": "pierre.peterlongo@inria.fr",
                    "url": "https://colibread.inria.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://colibread.inria.fr/software/discosnp/",
            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-25T14:25:58.458039Z",
            "teams": [
                "GenOuest"
            ],
            "source_repository": null
        }
    ]
}