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            "homepage": "http://genopole.pasteur.fr/SynTView/",
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            "description": "Tool for viewing protein structure neighbours.",
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            "last_update": "2021-04-25T13:21:04Z",
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            "name": "MPscan",
            "description": "MPscan (multi-pattern scan) is a program for mapping short reads (<30bp) exactly on a set of reference sequences (eg, a genome) without indexing the reference. MPscan performs only exact mapping (no substitution, nor indels), is fast (optimal complexity), and easy to use.",
            "homepage": "http://www.atgc-montpellier.fr/mpscan/",
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            "biotoolsCURIE": "biotools:mpscan",
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                    "name": "Vincent Lefort",
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            "last_update": "2021-04-22T06:40:43Z",
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            "description": "R package dedicated to the differential analysis of RNA-seq data. It provides tools to generate descriptive and diagnostic graphs, to run the differential analysis with one of the well known DESeq2 or edgeR packages and to export the results into easily readable tab-delimited files. It also facilitates the generation of a HTML report which displays all the figures produced, explains the statistical methods and gives the results of the differential analysis.",
            "homepage": "https://github.com/PF2-pasteur-fr/SARTools",
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            "tool_type": [
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            "collection": [
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            "scientific_topics": [
                "http://edamontology.org/topic_2269",
                "http://edamontology.org/topic_3308"
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                "10.1371/journal.pone.0157022"
            ],
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                "Windows",
                "Mac"
            ],
            "tool_credit": [
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                    "type_role": [
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                        "Primary contact"
                    ],
                    "name": "Marie-Agnès Dillies",
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                    "name": "Institut Pasteur",
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                    "url": "https://research.pasteur.fr",
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                    "note": null
                },
                {
                    "type_role": [
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                        "Primary contact"
                    ],
                    "name": "Jean-Yves Coppée",
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            "last_update": "2021-04-17T15:12:05Z",
            "teams": [
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        },
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            "homepage": "https://biii.eu",
            "biotoolsID": "BISE",
            "biotoolsCURIE": "biotools:BISE",
            "tool_type": [
                "Database portal",
                "Bioinformatics portal",
                "Web application"
            ],
            "collection": [
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                "NEUBIAS"
            ],
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                    ],
                    "name": "Matúš Kalaš",
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                    "url": null,
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                    "gridid": null,
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                    "note": "Coordinator of the EDAM-bioimaging ontology development"
                },
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                    ],
                    "name": "Kota Miura",
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                    "url": null,
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                    "gridid": null,
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                },
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                    ],
                    "name": "Taggers",
                    "email": null,
                    "url": "http://biii.eu/show-taggers",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Consortium",
                    "note": "People curating tools"
                },
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                    "type_role": [
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                    ],
                    "name": "Chong Zhang",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": "Co-leader of the developement"
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                    "type_role": [
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                    ],
                    "name": "NEUBIAS Network of Bioimage Analysts",
                    "email": null,
                    "url": "https://neubias.eu",
                    "orcidid": null,
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                    ],
                    "name": "Leandro Scholz",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-2411-0429",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": "Worked on the curation instructions"
                },
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                    ],
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                    "note": "Leader of the project"
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                    "name": "Alban Gaignard",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0002-3597-8557",
                    "gridid": null,
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                    ],
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                    "url": null,
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                    "gridid": null,
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                    "note": "Development of Python scripts"
                }
            ],
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            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2021-03-26T15:45:10Z",
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            "homepage": "https://github.com/elvanov/MOGAMUN",
            "biotoolsID": "mogamun",
            "biotoolsCURIE": "biotools:mogamun",
            "tool_type": [
                "Library"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0602",
                "http://edamontology.org/topic_0203",
                "http://edamontology.org/topic_3170",
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                    "name": null,
                    "email": "anais.baudot@univ-amu.fr",
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            "last_update": "2021-02-26T09:22:38Z",
            "teams": [
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        },
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            "id": 69,
            "name": "WheatIS",
            "description": "This project aims at building an International Wheat Information System (WheatIS) to support the wheat research community. The main objective is to provide a single-access web based system to access to the available data resources and bioinformatics tools. The web portal indexes and makes findable any kind of data from wheat related species. \nThe WheatIS search is an implementation of DataDiscovery.",
            "homepage": "https://urgi.versailles.inrae.fr/wheatis/",
            "biotoolsID": "WheatIS",
            "biotoolsCURIE": "biotools:WheatIS",
            "tool_type": [
                "Database portal",
                "Web service",
                "Web API",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "URGI"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0780",
                "http://edamontology.org/topic_0610",
                "http://edamontology.org/topic_3071",
                "http://edamontology.org/topic_0091",
                "http://edamontology.org/topic_3810"
            ],
            "primary_publication": [
                "10.1186/s13059-018-1491-4"
            ],
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                {
                    "type_role": [
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                        "Primary contact"
                    ],
                    "name": "Support service",
                    "email": "urgi-support@inrae.fr",
                    "url": null,
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            ],
            "tool_licence": "BSD-3-Clause",
            "documentation": "https://urgi.versailles.inra.fr/wheatis/about",
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            "last_update": "2021-02-15T15:54:13Z",
            "teams": [
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            ],
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        },
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            "id": 241,
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            "homepage": "https://ippidb.pasteur.fr",
            "biotoolsID": "ippi-db",
            "biotoolsCURIE": "biotools:ippi-db",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3343"
            ],
            "primary_publication": [],
            "operating_system": [],
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                    "name": "Olivier Sperandio",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-6610-2729",
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                }
            ],
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            "last_update": "2021-01-14T17:37:37Z",
            "teams": [],
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        },
        {
            "id": 89,
            "name": "Workflow4Metabolomics",
            "description": "First fully open-source and collaborative online platform for computational metabolomics. It includes preprocessing, normalization, quality control, statistical analysis of LC/MS, FIA-MS, GC/MS and NMR data.",
            "homepage": "https://workflow4metabolomics.org/",
            "biotoolsID": "workflow4metabolomics",
            "biotoolsCURIE": "biotools:workflow4metabolomics",
            "tool_type": [
                "Bioinformatics portal"
            ],
            "collection": [
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            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2259",
                "http://edamontology.org/topic_3172",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [
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            ],
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                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "MetaboHUB - National infrastructure in metabolomics & fluxomics",
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                    "url": "https://www.metabohub.fr/home.html",
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                },
                {
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                    "name": "Christophe Caron",
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                },
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                },
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                    "name": "Gildas Le Corguillé",
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                },
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                },
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                    ],
                    "name": "Yann Guitton",
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                    "url": "https://www.laberca.org/plateforme-analytique/presentation/",
                    "orcidid": "https://orcid.org/0000-0002-4479-0636",
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                },
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                    "type_role": [
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                    "url": "https://www6.toulouse.inrae.fr/axiomm",
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                },
                {
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                    "name": "Misharl Monsoor",
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                    "url": "http://abims.sb-roscoff.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
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                    "name": "Etienne A. Thévenot",
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