GET /api/tool/?format=api&offset=120&ordering=-tool_licence
HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "count": 233,
    "next": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=140&ordering=-tool_licence",
    "previous": "https://catalogue.france-bioinformatique.fr/api/tool/?format=api&limit=20&offset=100&ordering=-tool_licence",
    "results": [
        {
            "id": 205,
            "name": "DiscoSNP",
            "description": "This software is designed for discovering Single Nucleotide Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation Sequencers (NGS).",
            "homepage": "https://colibread.inria.fr/software/discosnp/",
            "biotoolsID": "discosnp",
            "biotoolsCURIE": "biotools:discosnp",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [
                "GATB"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_2885",
                "http://edamontology.org/topic_0199",
                "http://edamontology.org/topic_3053",
                "http://edamontology.org/topic_3168"
            ],
            "primary_publication": [
                "10.1093/nar/gku1187"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Pierre Peterlongo",
                    "email": "pierre.peterlongo@inria.fr",
                    "url": "https://colibread.inria.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "GenOuest",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://colibread.inria.fr/software/discosnp/",
            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-25T14:25:58.458039Z",
            "teams": [
                "GenOuest"
            ],
            "source_repository": null
        },
        {
            "id": 141,
            "name": "DroPNet",
            "description": "DroPNet is a webserver for generating and analyzing Drosophila protein-protein interaction networks. Input data is a list of genes from an experiment such as RNAi screen.",
            "homepage": "http://dropnet.isima.fr",
            "biotoolsID": "dropnet",
            "biotoolsCURIE": "biotools:dropnet",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3523",
                "http://edamontology.org/topic_3678",
                "http://edamontology.org/topic_0128",
                "http://edamontology.org/topic_3957",
                "http://edamontology.org/topic_0602"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "RENAUD Yoan",
                    "email": "renaud@isima.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://dropnet.gred-clermont.fr/DroPNet_project/UserManual.pdf",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 72000,
            "last_update": "2018-12-10T12:58:56Z",
            "teams": [
                "AuBi"
            ],
            "source_repository": null
        },
        {
            "id": 189,
            "name": "Erpin",
            "description": "Easy RNA Profile IdentificatioN takes as input an RNA sequence alignment and secondary structure annotation and will identify a wide variety of known RNA motifs (such as tRNAs, 5S rRNAs, SRP RNA, C/D box snoRNAs, hammerhead motifs, miRNAs and others) in your sequence(s) of interest. Also contains tool for drawing secondary structure of motifs.",
            "homepage": "http://rna.igmors.u-psud.fr/Software/erpin.php",
            "biotoolsID": "erpin",
            "biotoolsCURIE": "biotools:erpin",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0097",
                "http://edamontology.org/topic_0099",
                "http://edamontology.org/topic_3307"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Daniel Gautheret",
                    "email": "daniel.gautheret@u-psud.fr",
                    "url": "http://rna.igmors.u-psud.fr/gautheret/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://rna.igmors.u-psud.fr/Software/erpin.php",
            "maturity": null,
            "cost": null,
            "unique_visits": 350,
            "citations": null,
            "annual_visits": 415,
            "last_update": "2024-11-25T15:02:47.019198Z",
            "teams": [
                "EBIO"
            ],
            "source_repository": null
        },
        {
            "id": 242,
            "name": "WAVES",
            "description": "WAVES is a web application dedicated to bioinformatic tool integration. It provides an efficient way to implement a service for any bioinformatic software. Such services are automatically made available in three ways: web pages, web forms to include in remote websites, and a RESTful web services API to access remotely from applications. In order to fulfill the service’s computational needs, WAVES can perform computation on various resources and environments, such as Galaxy instances.",
            "homepage": "http://www.atgc-montpellier.fr/waves/",
            "biotoolsID": "WAVES",
            "biotoolsCURIE": "biotools:WAVES",
            "tool_type": [
                "Bioinformatics portal",
                "Web service",
                "Web API",
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3372",
                "http://edamontology.org/topic_0091"
            ],
            "primary_publication": [
                "10.1093/bioinformatics/bty639"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "LIRMM",
                    "email": null,
                    "url": "http://www.lirmm.fr/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer",
                        "Maintainer"
                    ],
                    "name": "Marc Chakiachvili",
                    "email": "mchakiachvili@ebi.ac.uk",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact",
                        "Contributor"
                    ],
                    "name": "Vincent Lefort",
                    "email": "vincent.lefort@lirmm.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://waves-core.readthedocs.io/",
            "maturity": "Emerging",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 177,
            "name": "HexServer",
            "description": "A FFT-based protein docking server powered by graphics processors, HexServer rapidly produces a ranked list of docking predictions for input PDB protein structures.",
            "homepage": "http://hexserver.loria.fr/",
            "biotoolsID": "hexserver",
            "biotoolsCURIE": "biotools:hexserver",
            "tool_type": [
                "Web application"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0166",
                "http://edamontology.org/topic_2275",
                "http://edamontology.org/topic_0078",
                "http://edamontology.org/topic_2814",
                "http://edamontology.org/topic_0082"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Dave Ritchie",
                    "email": "dave.ritchie@loria.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://hexserver.loria.fr/help.php",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 5000,
            "last_update": "2024-11-25T15:08:17.085207Z",
            "teams": [
                "MBI-DS4H"
            ],
            "source_repository": null
        },
        {
            "id": 155,
            "name": "HHalign-Kbest",
            "description": "Useful to automatically obtain optimized alignments and models in case of low sequence identity (<35%) between a query and a template protein. It can generate k suboptimal (e.g. top-k scoring) alignments rather than only the optimal one which may contain small to large errors.",
            "homepage": "http://bioserv.rpbs.univ-paris-diderot.fr/services/HHalign-Kbest/",
            "biotoolsID": "hhalign-kbest",
            "biotoolsCURIE": "biotools:hhalign-kbest",
            "tool_type": [
                "Web application",
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0081",
                "http://edamontology.org/topic_0736",
                "http://edamontology.org/topic_2814"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Raphael Guerois",
                    "email": null,
                    "url": "https://scholar.google.com/citations?user=M7Ln2zQAAAAJ&hl=es",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://bioserv.rpbs.univ-paris-diderot.fr/services/HHalign-Kbest/#faq",
            "maturity": null,
            "cost": null,
            "unique_visits": 70,
            "citations": null,
            "annual_visits": 260,
            "last_update": "2024-11-25T14:00:57.608636Z",
            "teams": [
                "RPBS"
            ],
            "source_repository": null
        },
        {
            "id": 241,
            "name": "iPPI-DB",
            "description": "IPPI-DB is a database of modulators of protein-protein interactions. It contains exclusively small molecules and therefore no peptides. The data are retrieved from the literature either peer reviewed scientific articles or world patents. A large variety of data is stored within IPPI-DB: structural, pharmacological, binding and activity profile, pharmacokinetic and cytotoxicity when available, as well as some data about the PPI targets themselves.",
            "homepage": "https://ippidb.pasteur.fr",
            "biotoolsID": "ippi-db",
            "biotoolsCURIE": "biotools:ippi-db",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3343"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [],
                    "name": "Olivier Sperandio",
                    "email": null,
                    "url": null,
                    "orcidid": "https://orcid.org/0000-0001-6610-2729",
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2021-01-14T17:37:37Z",
            "teams": [],
            "source_repository": "https://gitlab.pasteur.fr/ippidb/ippidb-web/"
        },
        {
            "id": 197,
            "name": "JASS",
            "description": "software package that handles the computation of the joint statistics over sets of selected GWAS results, and the interactive exploration of the results through a web interface.",
            "homepage": "http://statistical-genetics.pages.pasteur.fr/jass/",
            "biotoolsID": "jass",
            "biotoolsCURIE": "biotools:jass",
            "tool_type": [
                "Web service",
                "Web application",
                "Command-line tool"
            ],
            "collection": [
                "Institut Pasteur"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3517",
                "http://edamontology.org/topic_3053",
                "http://edamontology.org/topic_2269"
            ],
            "primary_publication": [
                "10.1093/nargab/lqaa003",
                "10.1101/714832v1"
            ],
            "operating_system": [
                "Linux"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Hanna Julienne",
                    "email": "hanna.julienne@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/member/hanna-julienne/",
                    "orcidid": "https://orcid.org/0000-0001-8214-9412",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Vincent Guillemot",
                    "email": "vincent.guillemot@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/member/vincent-guillemot/",
                    "orcidid": "https://orcid.org/0000-0002-7421-0655",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Pierre Lechat",
                    "email": "pierre.lechat@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/member/pierre-lechat/",
                    "orcidid": "https://orcid.org/0000-0003-1050-5582",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Carla Lasry",
                    "email": null,
                    "url": "https://research.pasteur.fr/fr/member/carla-lasry/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Chunzi Yao",
                    "email": "chunzi.yao@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/member/chunzi-yao/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Vincent Laville",
                    "email": "vincent.laville@pasteur.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Contributor"
                    ],
                    "name": "Bjarni Vilhjalmsson",
                    "email": null,
                    "url": "https://pure.au.dk/portal/en/persons/bjarni-johann-vilhjlmsson(35c047ab-0899-4434-91bb-121e4878ec76).html",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Developer"
                    ],
                    "name": "Hervé Ménager",
                    "email": "herve.menager@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/search/herve%20menager",
                    "orcidid": "https://orcid.org/0000-0002-7552-1009",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Aschard",
                    "email": "hugues.aschard@pasteur.fr",
                    "url": "https://research.pasteur.fr/fr/member/hugues-aschard/",
                    "orcidid": "http://orcid.org/0000-0002-7554-6783",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://statistical-genetics.pages.pasteur.fr/jass/",
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T14:46:08.475046Z",
            "teams": [],
            "source_repository": "https://gitlab.pasteur.fr/statistical-genetics/jass"
        },
        {
            "id": 143,
            "name": "leBIBI",
            "description": "Quick bioInformatic phylogeny of prokaryotes.",
            "homepage": "https://umr5558-bibiserv.univ-lyon1.fr/lebibi/lebibi.cgi",
            "biotoolsID": "leBIBI",
            "biotoolsCURIE": "biotools:leBIBI",
            "tool_type": [],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0084"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 154145,
            "last_update": "2019-11-06T11:33:13Z",
            "teams": [
                "PRABI-Lyon-Grenoble"
            ],
            "source_repository": null
        },
        {
            "id": 53,
            "name": "LepidoDB",
            "description": "Genomics of two major lepidopteran pests.",
            "homepage": "http://www.inra.fr/lepidodb",
            "biotoolsID": "lepidodb",
            "biotoolsCURIE": "biotools:lepidodb",
            "tool_type": [
                "Database portal"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0622"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "BIPAA platform",
                    "email": "bipaa@rennes.inra.fr",
                    "url": "http://www.inra.fr/bipaa",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Provider"
                    ],
                    "name": "GenOuest",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Institute",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://bipaa.genouest.org/is/lepidodb/",
            "maturity": null,
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2018-12-11T18:57:25Z",
            "teams": [
                "GenOuest"
            ],
            "source_repository": null
        },
        {
            "id": 148,
            "name": "Vidjil",
            "description": "Open-source platform for the interactive analysis of high-throughput sequencing data from lymphocyte recombinations. It contains an algorithm gathering reads into clonotypes according to their V(D)J junctions, a web application made of a sample, experiment and patient database and a visualization for the analysis of clonotypes along the time.",
            "homepage": "http://www.vidjil.org/",
            "biotoolsID": "vidjil",
            "biotoolsCURIE": "biotools:vidjil",
            "tool_type": [
                "Web application",
                "Web interface",
                " Command-line"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_0080",
                "http://edamontology.org/topic_0804"
            ],
            "primary_publication": [
                "10.1371/journal.pone.0172249"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Support",
                    "email": "contact@vidjil.org",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://github.com/vidjil/vidjil",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2018-12-10T12:58:58Z",
            "teams": [
                "Bilille"
            ],
            "source_repository": null
        },
        {
            "id": 111,
            "name": "Galaxy Pasteur",
            "description": "A wide variety of tools from the Galaxy instance of Institut Pasteur, France.",
            "homepage": "https://galaxy.pasteur.fr/",
            "biotoolsID": "Galaxy_Pasteur",
            "biotoolsCURIE": "biotools:Galaxy_Pasteur",
            "tool_type": [
                "Workbench"
            ],
            "collection": [
                "elixir-fr-sdp-2019"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0080"
            ],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-03-16T18:06:05Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 52,
            "name": "Gametogenesis and reproductive tissue expression",
            "description": "High-throughput expression data relevant for germline development and fertility across species.",
            "homepage": "http://www.germonline.org/",
            "biotoolsID": "germonline",
            "biotoolsCURIE": "biotools:germonline",
            "tool_type": [
                "Database portal"
            ],
            "collection": [
                "DRCAT"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_0623"
            ],
            "primary_publication": [
                "10.1093/database/baq030"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": "michael.primig@inserm.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Documentor"
                    ],
                    "name": "DRCAT",
                    "email": null,
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Project",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://www.germonline.org/gol_4_userguide.pdf",
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T20:35:55.972418Z",
            "teams": [
                "GenOuest"
            ],
            "source_repository": "http://www.germonline.org/gol_4_userguide.pdf"
        },
        {
            "id": 129,
            "name": "GATB",
            "description": "C++ library of high level functions designed to benefit from recent advances in NGS data structures for handling huge datasets of sequencing data.",
            "homepage": "http://gatb.inria.fr/",
            "biotoolsID": "gatb",
            "biotoolsCURIE": "biotools:gatb",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3168",
                "http://edamontology.org/topic_0654",
                "http://edamontology.org/topic_3071"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": null,
                    "url": "https://gatb.inria.fr/about/",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "https://gatb.inria.fr/gatb-global-architecture/",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2024-11-25T16:00:25.170196Z",
            "teams": [
                "GenOuest"
            ],
            "source_repository": null
        },
        {
            "id": 245,
            "name": "Gbrowse giant virus",
            "description": "A genome browser instance dedicated to giant viruses discovered by the IGS Laboratory",
            "homepage": "https://www.igs.cnrs-mrs.fr/cgi-bin/gb2/gbrowse",
            "biotoolsID": "gbrowse_giant_virus",
            "biotoolsCURIE": "biotools:gbrowse_giant_virus",
            "tool_type": [],
            "collection": [],
            "scientific_topics": [],
            "primary_publication": [],
            "operating_system": [],
            "tool_credit": [],
            "tool_licence": null,
            "documentation": null,
            "maturity": null,
            "cost": null,
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2022-12-01T20:12:00.006926Z",
            "teams": [],
            "source_repository": null
        },
        {
            "id": 100,
            "name": "Genomicus-fungi",
            "description": "Genomicus-fungi is a genome browser that enables users to navigate in fungi genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus-fungi/",
            "biotoolsID": "Genomicus-fungi",
            "biotoolsCURIE": "biotools:Genomicus-fungi",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0622",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_0623"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 98,
            "name": "Genomicus-metazoa",
            "description": "Genomicus-metazoa is a genome browser that enables users to navigate in metazoa genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus-metazoa/",
            "biotoolsID": "Genomicus-metazoa",
            "biotoolsCURIE": "biotools:Genomicus-metazoa",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0622",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_0623"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2024-11-24T14:56:24.333237Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 99,
            "name": "Genomicus-protists",
            "description": "Genomicus-protists is a genome browser that enables users to navigate in protists genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time.",
            "homepage": "http://www.genomicus.biologie.ens.fr/genomicus-protists/",
            "biotoolsID": "Genomicus-protists",
            "biotoolsCURIE": "biotools:Genomicus-protists",
            "tool_type": [
                "Database portal",
                "Web application"
            ],
            "collection": [
                "elixir-fr-sdp-2019",
                "GENOMICUS"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3943",
                "http://edamontology.org/topic_3299",
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0621",
                "http://edamontology.org/topic_0622",
                "http://edamontology.org/topic_0194",
                "http://edamontology.org/topic_0623"
            ],
            "primary_publication": [
                "10.1093/nar/gks1156"
            ],
            "operating_system": [],
            "tool_credit": [
                {
                    "type_role": [
                        "Support"
                    ],
                    "name": null,
                    "email": "genomicus-web@ens.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": null,
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Hugues Roest Crollius",
                    "email": "hrc@ens.fr",
                    "url": "http://www.ibens.ens.fr/?rubrique43",
                    "orcidid": "http://orcid.org/0000-0002-8209-173X",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                },
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Alexandra Louis",
                    "email": "alouis@biologie.ens.fr",
                    "url": "http://www.ibens.ens.fr/spip.php?article182",
                    "orcidid": "http://orcid.org/0000-0001-7032-5650",
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": null,
            "maturity": "Mature",
            "cost": "Free of charge",
            "unique_visits": null,
            "citations": null,
            "annual_visits": null,
            "last_update": "2020-06-16T10:55:27Z",
            "teams": [
                "PB-IBENS"
            ],
            "source_repository": null
        },
        {
            "id": 173,
            "name": "Tango",
            "description": "A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. The model used here, is designed to predict cross-beta aggregation in peptides and denatured proteins and consists of a phase-space encompassing the random coil and 4 possible structural states: beta-turn, alpha-helix, beta-sheet aggregation and alpha-helical aggregation.",
            "homepage": "http://tango.crg.es/",
            "biotoolsID": "tango",
            "biotoolsCURIE": "biotools:tango",
            "tool_type": [
                "Command-line tool"
            ],
            "collection": [],
            "scientific_topics": [
                "http://edamontology.org/topic_3510",
                "http://edamontology.org/topic_0081",
                "http://edamontology.org/topic_0078"
            ],
            "primary_publication": [],
            "operating_system": [
                "Linux",
                "Windows"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": null,
                    "email": null,
                    "url": "http://tango.crg.es/support.jsp",
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://tango.crg.es/Tango_Handbook.pdf",
            "maturity": null,
            "cost": null,
            "unique_visits": 0,
            "citations": null,
            "annual_visits": 0,
            "last_update": "2018-12-10T12:58:45Z",
            "teams": [
                "CBiB"
            ],
            "source_repository": null
        },
        {
            "id": 162,
            "name": "HCA (hydrophobic cluster analysis)",
            "description": "The HCA method is based on the use of a bidimensional plot, called the HCA plot. The bidimensional plot is associated with an alpha helicoidal pitch (3.6 residue/turn, connectivity distance of 4) which has been shown to offer the best correspondence between clusters and regular secondary structures. Examination of the HCA plot of a protein sequence allow to easily identify globular regions from non globular ones and, in globular regions, to identify secondary structures.",
            "homepage": "http://mobyle.rpbs.univ-paris-diderot.fr/cgi-bin/portal.py?form=HCA#forms::HCA",
            "biotoolsID": "hca",
            "biotoolsCURIE": "biotools:hca",
            "tool_type": [
                "Web application"
            ],
            "collection": [
                "Proteomics"
            ],
            "scientific_topics": [
                "http://edamontology.org/topic_3542",
                "http://edamontology.org/topic_0121"
            ],
            "primary_publication": [
                "10.1007/s000180050082"
            ],
            "operating_system": [
                "Linux",
                "Windows",
                "Mac"
            ],
            "tool_credit": [
                {
                    "type_role": [
                        "Primary contact"
                    ],
                    "name": "Isabelle Callebaut",
                    "email": "Isabelle.Callebaut@lmcp.jussieu.fr",
                    "url": null,
                    "orcidid": null,
                    "gridid": null,
                    "typeEntity": "Person",
                    "note": null
                }
            ],
            "tool_licence": null,
            "documentation": "http://bioserv.rpbs.univ-paris-diderot.fr/services/HCA/",
            "maturity": null,
            "cost": null,
            "unique_visits": 3200,
            "citations": null,
            "annual_visits": 10000,
            "last_update": "2024-11-24T15:47:21.770746Z",
            "teams": [
                "RPBS"
            ],
            "source_repository": null
        }
    ]
}