{"count":45,"next":null,"previous":"https://catalogue.france-bioinformatique.fr/api/team/?format=json&limit=20&offset=20&ordering=-deputies","results":[{"id":2,"name":"Institut Curie - Bioinformatique","logo_url":"https://curie.fr/_nuxt/logo-color.DJwC55FV.svg","description":"La Plateforme de Bioinformatique de l’Institut Curie est composée de 20 bioinformaticiens, biostatisticiens et ingénieurs logiciels, qui offrent une expertise multidisciplinaire et  apportent un support aux plateformes biotechnologiques de Curie Core Tech, ainsi qu’aux unités de recherche et à hôpital dans leurs activités quotidiennes. Nos compétences portent sur la gestion et l’analyse de données, le développement logiciels et le calcul scientifique. Nous avons cinq missions principales : (1) intégration de données et connaissances, (2) support collaboratif aux biologistes et cliniciens pour l’analyse bioinformatiques et biostatistiques de données, (4) support au calcul scientifique et (5) coordination des activités bioinformatiques au sein de l’Institut Curie.","expertise":[],"expertise_description":"intégration de données et connaissances, support collaboratif aux biologistes et cliniciens pour l’analyse bioinformatiques et biostatistiques de données, support au calcul scientifique.","linkCovid19":"","homepage":"https://curie.fr/plateforme/curiecoretech-bioinformatique-cubic","unitId":"","address":"26 rue d’Ulm\r\n75005 Paris\r\nFrance","city":"Paris","country":"France","communities":[],"projects":[],"affiliatedWith":[{"id":56,"name":"INSERM","url":"https://catalogue.france-bioinformatique.fr/api/organisation/INSERM/?format=json"}],"publications":[""],"certifications":[],"fundedBy":[{"id":56,"name":"INSERM","url":"https://catalogue.france-bioinformatique.fr/api/organisation/INSERM/?format=json"}],"keywords":["HPC","Biostatistics","long read sequencing","alphafold","Multi-scale analysis and modelling","NGS Data Analysis","Bioinformatics & Biomedical","Web portals"],"fields":["Biomédical","Biologie","Biotechnologie"],"orgid":null,"tools":["nebula"],"services":[],"leaders":[],"deputies":[],"scientificLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/32/?format=json"],"technicalLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/306/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/569/?format=json"],"members":["https://catalogue.france-bioinformatique.fr/api/userprofile/389/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/508/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/306/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/13/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/32/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/79/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/165/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/256/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/314/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/330/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/249/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/534/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/569/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/586/?format=json"],"maintainers":[],"ifbMembership":"Member platform","platforms":[],"is_active":true,"closing_date":null,"lat":"48.843605","lng":"2.344745","updated_at":"2025-12-09T09:53:03.096208Z"},{"id":5,"name":"INCa-SLC","logo_url":null,"description":"Cette structure a été créée à l'initiative de l'INCa dans le cadre de sa participation à l'\"International  Cancer Genome Consortium\" (ICGC).\r\n \r\nElle a trois missions :\r\n1 collecter ou préparer puis valider les acides nucléiques (ADN normal, ADN tumoral, ARN tumoral,...)  qui   seront   examinés   avec   les   techniques   de  la  génomique:   puce   de  génotypage,   puce d'expression, RNA-­seq, DNA-­‐eq en génomes complets et en éxomes),\r\n2 assurer la liaison avec les centres de génomique (académiques  ou privés) réalisant le séquençage haut-­‐débit,\r\n3 effectuer l'analyse des données de séquence transmises par ces centres de manière à en extraire l'information  (variants  somatiques  et  structuraux,  nombre  de  copie,  niveaux  d'expression  en RNA-­‐seq) utile aux équipes biomédicales.\r\n \r\nPour  remplir  sa  mission,  la  plateforme  a  développé  une  application  Internet  permettant  d'assurer  la gestion  de grands  projets  multicentriques  en toute  transparence  pour  les collaborateurs.  Elle  a mis en place  des  procédures  de  contrôle  qualité  des  échantillons  à  analyser.  Elle  dessine  et  automatise  des pipelines d'analyse pour les données de génomique qu'elle reçoit.","expertise":[],"expertise_description":"","linkCovid19":"","homepage":"http://www.synergielyoncancer.fr/","unitId":"","address":"28 rue Laënnec\r\nFondation Synergie Lyon Cancer, Bât. Cheney D\r\n69008 Lyon\r\nFrance","city":"Lyon","country":"France","communities":[],"projects":[],"affiliatedWith":[],"publications":[""],"certifications":[],"fundedBy":[{"id":4,"name":"IFB - ELIXIR-FR","url":"https://catalogue.france-bioinformatique.fr/api/organisation/IFB%20-%20ELIXIR-FR/?format=json"}],"keywords":[],"fields":["Biomédical","Biologie"],"orgid":null,"tools":[],"services":[],"leaders":[],"deputies":[],"scientificLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/629/?format=json"],"technicalLeaders":[],"members":["https://catalogue.france-bioinformatique.fr/api/userprofile/335/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/505/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/38/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/218/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/364/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/568/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/579/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/603/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/606/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/620/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/629/?format=json"],"maintainers":[],"ifbMembership":"None","platforms":[],"is_active":false,"closing_date":"2023-03-15","lat":"45.735673","lng":"4.887571","updated_at":"2025-10-21T13:07:13.251070Z"},{"id":22,"name":"Genotoul-bioinfo","logo_url":"https://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png","description":"The Genotoul-Bioinfo facility is part of the Genotoul GIS. It is a team of the INRAE MIAT unit, part of the MathNum department and member of BioinfOmics (IR INRAE). It has been set up in 2000. Since 2009, it is one of the 13 IBISA bioinformatics platforms. Its missions are to provide computing and storage infrastructure dedicated to bioinformatics (software and databases are available on request) to approximately 1 200 users, to support biologists' projects mainly through collaboration and training, and to develop software for biologists and bioinformaticians.\r\nThe computing and storage infrastructure is composed by around 5000 cores, 83 Tera Byte memory and more than 7.5 Peta Byte disk space.","expertise":["http://edamontology.org/topic_0091"],"expertise_description":"The GenoToul bioinformatics facility provides access to high-performance computing resources, data analysis and programming expertise. Its permanent staff has many years of experience in supporting scientific programmes in biology and bioinformatics. The main axis of development and scientific support include high throughput sequencing data processing ((meta)genomic, pangenomic and biostatistics).","linkCovid19":"","homepage":"https://bioinfo.genotoul.fr/","unitId":"","address":"24 Chemin de Borde Rouge","city":"Castanet Tolosan","country":"France","communities":[],"projects":[],"affiliatedWith":[{"id":108,"name":"Genotoul","url":"https://catalogue.france-bioinformatique.fr/api/organisation/Genotoul/?format=json"},{"id":82,"name":"INRAE","url":"https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=json"},{"id":88,"name":"BioinfOmics","url":"https://catalogue.france-bioinformatique.fr/api/organisation/BioinfOmics/?format=json"},{"id":37,"name":"MIAT - Mathématiques et Informatique Appliquées de Toulouse","url":"https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=json"}],"publications":["10.1038/s41467-024-49025-2","10.1038/s41598-024-60938-2","10.1038/s41467-024-51032-2","10.1038/s41467-024-54042-2","10.21105/joss.06782","10.3389/fmicb.2024.1377047","10.21105/joss.06272","10.1016/j.bbadis.2024.167118","10.1186/s13059-024-03384-7","10.1111/zsc.12643","10.1080/15476286.2024.2417152","10.1111/mec.17425","10.1186/s13567-024-01329-3","10.1128/mbio.02428-24","10.1038/s41598-021-01066-z","10.1016/j.cub.2021.08.030","10.1093/molbev/msaa249","10.1038/s41467-021-21094-7","10.1007/978-3-030-73249-3_34","10.1016/j.msom.2021.10.020","10.1080/15476286.2020.1869892","10.7717/peerj.11885","10.1093/ve/veab093","10.3389/fgene.2021.655707","10.1111/raq.12542","10.7554/eLife.62858","10.3390/md19080452","10.3389/fgene.2021.659287","10.1016/j.isci.2020.101927","10.1371/journal.pcbi.1009321",""],"certifications":["Label IBiSA","France-Génomique","ISO  9001","CNOC (INRA)","NF X50-900","PF stratégique nationale INRA"],"fundedBy":[{"id":82,"name":"INRAE","url":"https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=json"}],"keywords":["Biostatistics","Pangenomic","Metagenomics","Small and long non-coding RNAs","Cluster"],"fields":["Biomédical","Agro-alimentaire","Environnement","Biotechnologie","Biologie"],"orgid":null,"tools":["metagwgs"],"services":[],"leaders":[],"deputies":[],"scientificLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/642/?format=json"],"technicalLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=json"],"members":["https://catalogue.france-bioinformatique.fr/api/userprofile/470/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/642/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/822/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/739/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/835/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/823/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/243/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/824/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/836/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/825/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/338/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/827/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/828/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/659/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/344/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/615/?format=json"],"maintainers":["https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/739/?format=json"],"ifbMembership":"Member platform","platforms":[],"is_active":true,"closing_date":null,"lat":"43.515910","lng":"1.498640","updated_at":"2025-12-01T11:00:08.920021Z"},{"id":23,"name":"PACA-Bioinfo","logo_url":"https://www.igs.cnrs-mrs.fr/wp-content/uploads/2025/12/LOGO_PACA_VECTO_WhiteBG-nomargin.png","description":"PACA Bioinfo's services focus on microbial genomics, metagenomics, comparative genomics, and molecular phylogenetics. It provides the community with various free online tools that can be accessed without prior registration, such as phylogeny.fr and ACDtools. The platform collaborates on genomics and metagenomics projects, providing the main bioinformatics support, particularly for teams at the \"Institut Méditerranéen de Microbiologie de Marseille\". With expertise in analyzing all types of genomes, it focuses in giant viruses.","expertise":["http://edamontology.org/topic_0797","http://edamontology.org/topic_0622","http://edamontology.org/topic_3170","http://edamontology.org/topic_3174","http://edamontology.org/topic_0080","http://edamontology.org/topic_0196","http://edamontology.org/topic_0781","http://edamontology.org/topic_0082"],"expertise_description":"PACA Bioinfo's services focus on microbial genomics, metagenomics, comparative genomics, molecular phylogenetics and structural bioinformatics. With expertise in analyzing all types of genomes, it focuses in giant viruses.","linkCovid19":"","homepage":"https://www.igs.cnrs-mrs.fr/paca-bioinfo/","unitId":"UMR7256","address":"163 Avenue de Luminy\r\nCase 934","city":"Marseille","country":"France","communities":[],"projects":[],"affiliatedWith":[{"id":52,"name":"CNRS","url":"https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=json"},{"id":38,"name":"IGS - Laboratoire Information Génomique et Structurale","url":"https://catalogue.france-bioinformatique.fr/api/organisation/IGS%20-%20Laboratoire%20Information%20G%C3%A9nomique%20et%20Structurale/?format=json"}],"publications":["10.1093/bioinformatics/bty640","10.1093/bioadv/vbab034","10.1093/femsml/uqac003","10.1128/JVI.01997-19","10.3389/fmicb.2019.00430","10.1186/s12864-018-4715-9","10.1080/23802359.2017.1285210","10.1128/JVI.00230-17","10.1038/ncomms15087","10.1038/ismej.2015.192","10.1111/mec.13621","10.1073/pnas.1506469112","10.1371/journal.pone.0090988","10.1371/journal.pone.0090989","10.1186/1471-2164-14-158","10.1111/mec.12108","10.1038/ismej.2013.116","10.1074/jbc.M111.314559","10.1371/journal.pgen.1003122","10.1186/gb-2012-13-5-r39","10.1371/journal.pone.0018528","10.1186/1743-422X-8-99","10.1105/tpc.110.076406","10.1186/gb-2009-10-10-r114","10.1186/1743-422X-6-178","10.1101/gr.091686.109","10.1016/j.jip.2009.03.011","10.1101/gr.091561.109","10.1186/1471-2164-10-352","","10.1093/nar/gkn180"],"certifications":["CATI - CTAI","RIO","label Plateforme Aix-Marseille"],"fundedBy":[{"id":52,"name":"CNRS","url":"https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=json"}],"keywords":["Virology","NGS Data Analysis","Metagenomics","Evolution and Phylogeny","metatranscriptomics","Sequence analysis","proteomics","Comparative genomics","Structural Bioinformatics"],"fields":["Biomédical","Biotechnologie","Environnement"],"orgid":"05v0fms67","tools":["acdtool","phylogeny.fr"],"services":[],"leaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/372/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/557/?format=json"],"deputies":["https://catalogue.france-bioinformatique.fr/api/userprofile/557/?format=json"],"scientificLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/372/?format=json"],"technicalLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/557/?format=json"],"members":["https://catalogue.france-bioinformatique.fr/api/userprofile/372/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/741/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/557/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/129/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/502/?format=json"],"maintainers":["https://catalogue.france-bioinformatique.fr/api/userprofile/557/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/372/?format=json"],"ifbMembership":"Associated Team","platforms":[],"is_active":true,"closing_date":null,"lat":"43.239127","lng":"5.436787","updated_at":"2025-12-12T08:59:53.115922Z"},{"id":4,"name":"ABiMS","logo_url":"https://abims.sb-roscoff.fr/sites/default/files/abims.png","description":"The mission of the ABiMS platform at the Roscoff Biological Station is to train and support researchers from the marine community and, more broadly, the life sciences, to analyze their data using bioinformatics methods. ABiMS belong to the French Institute of Bioinformatics (IFB) and the Bioinformatics Axe of the Regional project BioGenOuest. \r\n\r\nThrough its interactions with research units, ABiMS is a partner in several national and European research projects involving the development of bioanalysis activities, software engineering and scientific computing infrastructures. The ABIMS platform has notably developed a strong expertise in the analysis of RNAseq data of non-model species. It has also contributed in the development of reference databases for both observational and genomic data.","expertise":[],"expertise_description":"ABiMS offers custom developments to research teams within the framework of scientific collaborations formalised as projects: Software engineering (web appliance, database), Bioinformatics analysis ((RNA-seq, assembly, ...), E-infrastructure (HPC, Galaxy, JBrowse), Data management and access (FAIR and data lifecycle), Training and Support.","linkCovid19":"","homepage":"https://abims.sb-roscoff.fr/","unitId":"","address":"Place Georges Teissier - Station Biologique de Roscoff","city":"Roscoff","country":"France","communities":[],"projects":[],"affiliatedWith":[{"id":52,"name":"CNRS","url":"https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=json"},{"id":110,"name":"Sorbonne Université","url":"https://catalogue.france-bioinformatique.fr/api/organisation/Sorbonne%20Universit%C3%A9/?format=json"},{"id":65,"name":"SBR - Roscoff Marine Station","url":"https://catalogue.france-bioinformatique.fr/api/organisation/SBR%20-%20Roscoff%20Marine%20Station/?format=json"}],"publications":[""],"certifications":["Label IBiSA","ISO  9001"],"fundedBy":[{"id":52,"name":"CNRS","url":"https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=json"},{"id":110,"name":"Sorbonne Université","url":"https://catalogue.france-bioinformatique.fr/api/organisation/Sorbonne%20Universit%C3%A9/?format=json"}],"keywords":["Phylogeny","Ecology","NGS Data Analysis","Metagenomics","Web portals","High performance computing","metatranscriptomics","Population Genetics","Workflow development","Databases and information systems"],"fields":["Environnement","Biologie","Informatique"],"orgid":null,"tools":["galaxy_france","workflow4metabolomics"],"services":[],"leaders":[],"deputies":["https://catalogue.france-bioinformatique.fr/api/userprofile/299/?format=json"],"scientificLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/134/?format=json"],"technicalLeaders":["https://catalogue.france-bioinformatique.fr/api/userprofile/362/?format=json"],"members":["https://catalogue.france-bioinformatique.fr/api/userprofile/299/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/362/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/134/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/272/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/24/?format=json"],"maintainers":["https://catalogue.france-bioinformatique.fr/api/userprofile/134/?format=json","https://catalogue.france-bioinformatique.fr/api/userprofile/362/?format=json"],"ifbMembership":"Member platform","platforms":[],"is_active":true,"closing_date":null,"lat":"48.726769","lng":"-3.987521","updated_at":"2025-12-09T10:11:02.550941Z"}]}