Team List
Handles creating, reading and updating teams.
GET /api/team/?format=api&offset=20&ordering=scientificLeaders
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With expertise in analyzing all types of genomes, it focuses in giant viruses.", "expertise": [ "http://edamontology.org/topic_3174", "http://edamontology.org/topic_0196", "http://edamontology.org/topic_3170", "http://edamontology.org/topic_0797", "http://edamontology.org/topic_0622", "http://edamontology.org/topic_0080", "http://edamontology.org/topic_0082", "http://edamontology.org/topic_0781" ], "expertise_description": "PACA Bioinfo's services focus on microbial genomics, metagenomics, comparative genomics, molecular phylogenetics and structural bioinformatics. 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Analyse de données génomiques (microarray et NGS)\r\n- Microarray :\r\n- Gene Expression (Agilent, Affymetrix)\r\n- CGH array\r\n- microRNA array\r\n- NGS (DNA-seq):\r\n- Détection de SNP (WES, WGS, TS)\r\n- Détection de variants structuraux (LOH, CNV)\r\n- ChipSeq\r\n- NGS (RNA-seq) :\r\n- Analyse différentielle\r\n- recherche de transcrit de fusion\r\n- recherche de splicing alternatif\r\n- detection de SNP par RNA-seq\r\n\r\n● Conseil / Support\r\nElaboration de cahier des charges pour des projets de recherche à composante \"bioinformatique\" : définition du projet bioinformatique, définition des compétences requises, rédaction de fiche de poste, recrutement de bioinformaticien, estimation du coût global. La plateforme peut se positionner en partenaire du projet ou en prestataire de service.\r\n\r\n● Formations\r\nOrganisation de formations généraliste en interne. Organisation de formations spécifiques, sur demande, dans les locaux des demandeurs (utilisation d’un logiciel, explication de méthodologie bioinformatique, statistiques)\r\n\r\n● R&D\r\nDéveloppement /Maintenance de pipelines d’analyse.\r\nDéveloppement à facon d’outils d’annotation / de visualisation de données NGS Développement de DB de données génomiques\r\nParticipation au developpement de DB en médecine personnalisée", "expertise": [], "expertise_description": "", "linkCovid19": "", "homepage": "http://gustaveroussy.fr/fr/content/plateforme-de-bioinformatique-activit%C3%A9s", "unitId": "", "address": "114 rue Edouard Vaillant\r\nUMS INSERM 23/CNRS 3655 AMMICA\r\n94800 Villejuif\r\nFrance", "city": "Villejuif", "country": "France", "communities": [], "projects": [], "affiliatedWith": [ { "id": 56, "name": "INSERM", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INSERM/?format=api" }, { "id": 52, "name": "CNRS", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=api" } ], "publications": [ "" ], "certifications": [], "fundedBy": [ { "id": 56, "name": "INSERM", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INSERM/?format=api" }, { "id": 52, "name": "CNRS", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CNRS/?format=api" } ], "keywords": [], "fields": [ "Biologie", "Biomédical" ], "orgid": null, "tools": [], "services": [], "leaders": [], "deputies": [], "scientificLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/413/?format=api" ], "technicalLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/413/?format=api" ], "members": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/159/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/179/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/185/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/244/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/318/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/327/?format=api" ], "maintainers": [], "ifbMembership": "None", "platforms": [], "is_active": false, "closing_date": "2023-03-15", "lat": "48.794123", "lng": "2.346437", "updated_at": "2025-10-21T13:07:13.171252Z" }, { "id": 11, "name": "Pasteur HUB", "logo_url": "https://hub-portal.pasteur.cloud/logo-hub.png", "description": "Le centre de bioinformatique et de biostatistique est la partie service du département de biologie informatique. L’équipe du Hub comprend 50 experts en biostatistique et en bioinformatique. Créé en 2015, le C3BI comprend cinq unités de recherche en biologie computationnelle et le Hub de bioinformatique et biostatistique. La mission du centre est de développer la recherche méthodologique en bioinformatique et biostatistique, de donner une visibilité internationale à l'Institut Pasteur dans ce domaine, d'offrir un soutien aux unités de recherche expérimentale, et de développer les compétences informatiques et analytiques du campus. Les activités de la plateforme comprennent la participation à des projets de recherche et d'analyse, des missions sur le terrain au sein des unités et des plateformes du campus, des sessions de formation et d'enseignement ouvertes à nos partenaires, et fournissent un certain nombre de ressources à la communauté nationale et internationale. L’équipe du Hub et l’ensemble du département ont une longue expérience dans le développement de sites web (par exemple NGPhylogeny.fr), les calculs intensifs et la gestion des données de santé.", "expertise": [ "http://edamontology.org/topic_3372" ], "expertise_description": "", "linkCovid19": "", "homepage": "https://research.pasteur.fr/en/team/bioinformatics-and-biostatistics-hub/", "unitId": "", "address": "25 Rue du Dr Roux", "city": "Paris", "country": "France", "communities": [], "projects": [], "affiliatedWith": [ { "id": 48, "name": "Institut Pasteur", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/Institut%20Pasteur/?format=api" } ], "publications": [ "10.21105/joss.00698", "10.1093/bioinformatics/btab070", "" ], "certifications": [], "fundedBy": [ { "id": 48, "name": "Institut Pasteur", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/Institut%20Pasteur/?format=api" } ], "keywords": [], "fields": [ "Biologie", "Biomédical" ], "orgid": null, "tools": [ "edam-browser", "fqtools", "macsyfinder", "memhdx", "sartools", "shaman", "syntview", "VHRdb" ], "services": [], "leaders": [], "deputies": [], "scientificLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/432/?format=api" ], "technicalLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/432/?format=api" ], "members": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/251/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/461/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/73/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/432/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/184/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/408/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/414/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/379/?format=api" ], "maintainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/432/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/73/?format=api" ], "ifbMembership": "Member platform", "platforms": [], "is_active": true, "closing_date": null, "lat": "48.840351", "lng": "2.310813", "updated_at": "2025-10-21T13:07:13.054323Z" }, { "id": 19, "name": "PRABI-AMSB", "logo_url": "https://amsb.prabi.fr/amsb-logo.png", "description": "The PRABI-AMSB (Systems Biology Analysis and Modelling) is a Core facility specializing in bioinformatics, located on the Lyon Tech La Doua campus in Villeurbanne. 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With strong expertise and the integration of advanced technologies, including artificial intelligence, CBiB supports academic and industrial partners in extracting value from complex data. Its services cover the full data lifecycle, supported by high-performance infrastructures and a multidisciplinary team in bioinformatics.", "expertise": [ "http://edamontology.org/topic_3391", "http://edamontology.org/topic_3517", "http://edamontology.org/topic_3941", "http://edamontology.org/topic_0121", "http://edamontology.org/topic_0203", "http://edamontology.org/topic_0196", "http://edamontology.org/topic_0080", "http://edamontology.org/topic_0091", "http://edamontology.org/topic_3307" ], "expertise_description": "soon", "linkCovid19": "", "homepage": "https://www.cbib.u-bordeaux.fr/", "unitId": "", "address": "146 Rue Léo Saignat\r\n33076 Bordeaux\r\nFrance", "city": "Bordeaux", "country": "France", "communities": [], "projects": [], "affiliatedWith": [], "publications": [ "", "10.1093/eep/dvac022", "10.1017/S2633903X22000034", "10.3389/fbinf.2022.867111", "10.3389/fbinf.2022.999700", "10.15252/emmm.202115343", "10.1016/j.jhazmat.2023.131579", "10.1080/15592294.2023.2260963", "10.3390/ijms24119724", "10.5220/0011623500003414", "10.1128/spectrum.02251-22", "10.1021/acschembio.3c00440", "10.1038/s43018-023-00717-6", "10.1093/bioinformatics/btae282", "10.1038/s44321-025-00195-6", "10.1016/j.celrep.2024.113773", "10.1093/bioadv/vbae081", "10.1016/j.jgar.2024.12.006", "10.48550/arXiv.2505.08508", "10.1128/mbio.01360-24" ], "certifications": [ "Label IBiSA", "ISO 9001", "CNOC (INRA)", "NF X50-900" ], "fundedBy": [ { "id": 91, "name": "University of Bordeaux", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/University%20of%20Bordeaux/?format=api" } ], "keywords": [ "Artificial Intelligence", "cancer", "Image analysis", "spatial transcriptomics", "Metabolomics", "proteomics", "Integration of heterogeneous data", "Single-Cell Analysis", "Comparative genomics", "NGS Sequencing Data Analysis" ], "fields": [ "Biologie", "Biomédical", "Agro-alimentaire", "Environnement" ], "orgid": "057qpr032", "tools": [ "xeml-lab", "mix", "molligen", "tango", "xheinz" ], "services": [], "leaders": [], "deputies": [], "scientificLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/467/?format=api" ], "technicalLeaders": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/268/?format=api" ], "members": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/268/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/34/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/154/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/467/?format=api" ], "maintainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/34/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/268/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/154/?format=api" ], "ifbMembership": "Member platform", "platforms": [], "is_active": true, "closing_date": null, "lat": "44.824860", "lng": "-0.608450", "updated_at": "2025-12-09T14:21:19.010919Z" }, { "id": 20, "name": "PRABI-Lyon-Grenoble", "logo_url": null, "description": "Les thématiques de recherche du PRABI-Doua s’organisent autour d’un point de vue méthodologique, qui affirme l’importance de la modélisation tant mathématique qu’informatique et d’une perspective évolutive qui organise les recherches indépendamment du niveau d’organisation biologique. C’est dans la synergie entre des problématiques biologiques propres et des développements méthodologiques que naît la plus grande part des résultats scientifiques de cette composante. 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