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Cette édition de l’école aborde les nouveaux enjeux technologiques: elle s’articulera autour des différentes étapes qui mèneront à l’obtention d’un génome annoté à partir de données “long reads” et “hybride” : contrôle qualité des données, assemblage, scaffolding, polishing, annotation structurale et fonctionnelle (en session parallèle pour les procaryotes et les eucaryotes). \r\nL’école vise à introduire les concepts, à manipuler les outils informatiques et à en interpréter les résultats. Elle est basée sur une alternance de courtes sessions théoriques et d’ateliers pratiques. Les participants bénéficieront d’un tutorat personnalisé pour élaborer leur plan d’analyse, et effectuer les premières étapes de traitement de leurs propres données ou de celles de leur équipe.\r\nAttention : le tutorat n'a pas pour vocation de réaliser l’analyse complète des données des participants.\r\nPublic visé\r\nCette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.","homepage":"https://www.france-bioinformatique.fr/formation/ebaii2022_genomique/","is_draft":false,"costs":[],"topics":[],"keywords":[],"prerequisites":[],"openTo":"Everyone","accessConditions":"","maxParticipants":40,"contacts":["https://catalogue.france-bioinformatique.fr/api/userprofile/116/?format=json"],"elixirPlatforms":[],"communities":[],"sponsoredBy":[],"organisedByOrganisations":[],"organisedByTeams":[],"logo_url":"https://cvt.aviesan.fr/wp-content/themes/cvtaviesan/images/logo_cvt.png","updated_at":"2022-06-02T11:50:50.627601Z","type":"Training course","start_date":"2022-09-25","end_date":"2022-09-30","venue":"","city":"Roscoff","country":"France","geographical_range":"National","trainers":[],"trainingMaterials":[],"computingFacilities":[],"realisation_status":"past","registration_opening":"2022-01-25","registration_closing":"2022-03-15","registration_status":"closed","courseMode":"Onsite"},{"id":527,"name":"Ecole de Bioinformatique AVIESAN-IFB-Inserm Niveau 2","shortName":"EBAII-N2 2023","description":"Initiation au traitement des données de génomique obtenues par séquençage à haut débit -- Niveau 2","homepage":"https://ifb-elixirfr.github.io/EBAII/","is_draft":false,"costs":[],"topics":[],"keywords":[],"prerequisites":[],"openTo":"Everyone","accessConditions":"","maxParticipants":40,"contacts":["https://catalogue.france-bioinformatique.fr/api/userprofile/207/?format=json"],"elixirPlatforms":[],"communities":[],"sponsoredBy":[],"organisedByOrganisations":[{"id":53,"name":"AVIESAN","url":"https://catalogue.france-bioinformatique.fr/api/organisation/AVIESAN/?format=json"},{"id":56,"name":"INSERM","url":"https://catalogue.france-bioinformatique.fr/api/organisation/INSERM/?format=json"},{"id":4,"name":"IFB - ELIXIR-FR","url":"https://catalogue.france-bioinformatique.fr/api/organisation/IFB%20-%20ELIXIR-FR/?format=json"}],"organisedByTeams":[{"id":10,"name":"MIGALE","url":"https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=json"},{"id":14,"name":"BiGEst","url":"https://catalogue.france-bioinformatique.fr/api/team/BiGEst/?format=json"},{"id":4,"name":"ABiMS","url":"https://catalogue.france-bioinformatique.fr/api/team/ABiMS/?format=json"},{"id":29,"name":"IFB Core","url":"https://catalogue.france-bioinformatique.fr/api/team/IFB%20Core/?format=json"}],"logo_url":"https://moodle.france-bioinformatique.fr/pluginfile.php/1/core_admin/logocompact/300x300/1654772049/IFB-HAUT-COULEUR-PETIT.png","updated_at":"2023-05-17T10:06:59.076495Z","type":"Training course","start_date":"2023-06-05","end_date":"2023-06-09","venue":"Station Biologique","city":"Roscoff","country":"France","geographical_range":"","trainers":[],"trainingMaterials":[],"computingFacilities":[],"realisation_status":"past","registration_opening":null,"registration_closing":"2023-01-31","registration_status":"closed","courseMode":"Onsite"},{"id":644,"name":"EBAII : Ecole de Bioinformatique \"Traitement des données de génomique obtenues par séquençage à haut débit\"  niveau intermédiaire - session 2025","shortName":"EBAII N2 session juin 2025","description":"Objectifs\r\nLa formation s’adresse à des biologistes directement impliqués dans des projets “Next Generation Sequencing” (NGS). 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Les participants auront l'occasion d'explorer diverses thématiques, notamment le traitement de données de variants, ChIP-Seq, Bulk RNA-Seq, et Single-Cell RNA-Seq. 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