Event List
Handles creating, reading and updating events.
GET /api/event/?format=api&ordering=contacts
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Le webinaire abordera une explication approfondie des fichiers d'entrée requis pour la soumission, des champs demandés dans les template ainsi qu'une démonstration de l'utilisation des scripts développés pour automatiser la soumission des données et simplifier le processus.", "homepage": "https://moodle.france-bioinformatique.fr/course/view.php?id=44", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3366", "http://edamontology.org/topic_0219", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "Ce webinaire est ouvert à tous : n’hésitez pas à disséminer l’information dans vos unités.\r\nLes participants doivent s’inscrire ici : https://sondages.inrae.fr/index.php/768122?lang=fr", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/813/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/3/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 22, "name": "BReIF", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/BReIF/?format=api" } ], "organisedByOrganisations": [ { "id": 39, "name": "URGI - US1164", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/URGI%20-%20US1164/?format=api" }, { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-10-10T12:42:20.404551Z", "type": "Training course", "start_date": "2025-11-06", "end_date": "2025-11-06", "venue": "", "city": "Online", "country": "", "geographical_range": "National", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/3/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/813/?format=api" ], "trainingMaterials": [ { "id": 147, "name": "Data-brokering script", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Data-brokering%20script/?format=api" } ], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-10-09", "registration_closing": "2025-10-24", "registration_status": "closed", "courseMode": "Online" }, { "id": 728, "name": "WheatIS data discovery - AgBioData", "shortName": "WheatIS Search AgBioData", "description": "The WheatIS project aims at building an International Wheat Information System to support the wheat research community. The main objective is to provide a single-access web base system to access to the available data resources and bioinformatics tools. The project is endorsed by the Wheat Initiative.\r\nThe WheatIS data discovery tool allows to search data in all the wheat resources around the world.\r\nThis training will describe how to use the tool, what data are available, how to join, etc.", "homepage": "https://urgi.versailles.inrae.fr/About-us/News/WheatIS-DataDiscovery-webinar-on-AgBioData-conference", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3366", "http://edamontology.org/topic_3489", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "none" ], "openTo": "Internal personnel", "accessConditions": "Pour la communauté AgBioData", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/224/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-11T13:43:21.110089Z", "type": "Training course", "start_date": "2020-10-07", "end_date": "2020-10-07", "venue": "", "city": "", "country": "", "geographical_range": "International", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/224/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": "Online" }, { "id": 735, "name": "Datathon AGENT - 2021", "shortName": "FAIRDOM 2021", "description": "Datathon on experimental phenotypic data management using the FAIRDOM platform, and submission workflow using curation & validation tools.", "homepage": "https://agent-project.eu/news/agent-phenotyping-data-management", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3571", "http://edamontology.org/topic_3365", "http://edamontology.org/topic_3366", "http://edamontology.org/topic_3572", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "Attendees will bring their own data" ], "openTo": "Internal personnel", "accessConditions": "For H2020-AGENT project members only", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/504/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 21, "name": "H2020-AGENT", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/H2020-AGENT/?format=api" } ], "organisedByOrganisations": [ { "id": 39, "name": "URGI - US1164", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/URGI%20-%20US1164/?format=api" }, { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-13T13:27:24.532191Z", "type": "Training course", "start_date": "2021-04-23", "end_date": "2021-04-30", "venue": "", "city": "Versailles", "country": "France", "geographical_range": "International", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/504/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/755/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": "Online" }, { "id": 727, "name": "WheatIS data discovery - 2020", "shortName": "WheatIS Search 2020", "description": "The WheatIS project aims at building an International Wheat Information System to support the wheat research community. The main objective is to provide a single-access web base system to access to the available data resources and bioinformatics tools. The project is endorsed by the Wheat Initiative.\r\nThe WheatIS data discovery tool allows to search data in all the wheat resources around the world.\r\nThis training will describe how to use the tool, what data are available, how to join, etc.", "homepage": "https://urgi.versailles.inrae.fr/About-us/News/WheatIS-webinar", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3366", "http://edamontology.org/topic_3489", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "Public", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/224/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 20, "name": "Wheat Initiative", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Wheat%20Initiative/?format=api" } ], "organisedByOrganisations": [ { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-11T13:39:53.516064Z", "type": "Training course", "start_date": "2020-02-25", "end_date": "2020-02-25", "venue": "", "city": "", "country": "", "geographical_range": "International", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/224/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": "Online" }, { "id": 737, "name": "H2020-AGENT Datathon on experimental phenotypic data management using the FAIRDOM platform - 2022", "shortName": "FAIRDOM 2022", "description": "Datathon on experimental phenotypic data management using the FAIRDOM platform, and submission workflow using curation & validation tools.", "homepage": "https://urgi.versailles.inrae.fr/fairdom/events/1", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3571", "http://edamontology.org/topic_3365", "http://edamontology.org/topic_3366", "http://edamontology.org/topic_3572", "http://edamontology.org/topic_0625", "http://edamontology.org/topic_0780", "http://edamontology.org/topic_0091" ], "keywords": [ "Données" ], "prerequisites": [ "Attendees will bring their own data" ], "openTo": "Internal personnel", "accessConditions": "For H2020-AGENT project members only", "maxParticipants": null, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/504/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/8/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/755/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 21, "name": "H2020-AGENT", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/H2020-AGENT/?format=api" } ], "organisedByOrganisations": [ { "id": 39, "name": "URGI - US1164", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/URGI%20-%20US1164/?format=api" }, { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" } ], "organisedByTeams": [ { "id": 26, "name": "URGI", "url": "https://catalogue.france-bioinformatique.fr/api/team/URGI/?format=api" } ], "logo_url": "https://urgi.versailles.inra.fr/extension/inra/design/urgi/images/logoURGI_res72_2-82X1-98.png", "updated_at": "2025-09-13T13:27:15.246574Z", "type": "Training course", "start_date": "2022-04-11", "end_date": "2022-04-13", "venue": "", "city": "Versailles", "country": "France", "geographical_range": "International", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/755/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": "Blended" }, { "id": 724, "name": "SHORT-READ ALIGNMENT AND SMALL SIZE VARIANTS CALLING - December 14-16 2025", "shortName": "Variant calling", "description": "This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).\r\n \r\nThe session will take place in the room ‘salle de formation’ at INRAE center of Toulouse-Auzeville.\r\n\r\nPrerequisites: ability to use a Unix environment (see Unix training) and Cluster (see Cluster training).\r\n \r\nTool box: FastQC, BWA, Samtools, Picard tools, GATK, SnpSift / SnpEff, IGV.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-calling/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_2885", "http://edamontology.org/topic_0102" ], "keywords": [], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "hort-read alignment and small size variants calling (15/12/2025 - 16/12/2025)\r\nThe GenoToul bioinformatics platform, Sigenae and NED (GenPhySE) organize a series of training courses to familiarize yourself with the various resources it provides. 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Variant annotation (SNPeff / SNPsift).", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/88/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/31/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/sigenae-text-black-1.png", "updated_at": "2025-05-09T13:20:15.323810Z", "type": "Training course", "start_date": "2025-12-15", "end_date": "2025-12-16", "venue": "", "city": "castanet-tolosan", "country": "France", "geographical_range": "National", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-05-09", "registration_closing": "2025-12-08", "registration_status": "closed", "courseMode": "Online" }, { "id": 723, "name": "Improve your command line skills by learning a few words of Perl - December 8 2025", "shortName": "One line Perl", "description": "This “Perl one-liners” training session is organized by the Sigenae platform. Perl one-liners are small and awesome Perl programs that fit in a single line of code and perform many operations such as replacing of text, spacing, deleting, calculation, manipulation in files and many more. This training will allow you to discover the power of Perl on the command line and learn how to use it to automate your file manipulations and command line generation with classical file formats such as tabulated text, fastq, sam/bam, and vcf.\r\n\r\nThis training lasts one day and is focused on practice. It consists of 3 parts with a large variety of exercises:\r\n\r\nIntroduction to Perl and its characteristics: Perl is a widely used programming language for data processing and task automation. We will introduce the main characteristics of Perl and discuss why it is particularly suited for biologists who want to manipulate files and generate command lines.\r\nPerl on the command line: we will show how to use Perl on the command line to perform common tasks, such as searching and replacing strings, merging files, and loop over lists of files.\r\nConcrete examples: we will present several concrete examples drawn from biology, such as extracting information from genomic sequence files, converting files between different formats, and generating command lines for data biology tools.\r\n \r\nThe session will take place in the room ‘salle de formation MIAT’ at INRAE center of Toulouse-Auzeville.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/onelineperl/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [], "keywords": [ "Perl Langage" ], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/88/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/31/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - 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December 14-16 2025", "shortName": "Variant calling", "description": "This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).\r\n \r\nThe session will take place in the room ‘salle de formation’ at INRAE center of Toulouse-Auzeville.\r\n\r\nPrerequisites: ability to use a Unix environment (see Unix training) and Cluster (see Cluster training).\r\n \r\nTool box: FastQC, BWA, Samtools, Picard tools, GATK, SnpSift / SnpEff, IGV.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-calling/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_2885", "http://edamontology.org/topic_0102" ], "keywords": [], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "hort-read alignment and small size variants calling (15/12/2025 - 16/12/2025)\r\nThe GenoToul bioinformatics platform, Sigenae and NED (GenPhySE) organize a series of training courses to familiarize yourself with the various resources it provides. These resources are currently: the hardware infrastructure, biological data banks and widely used bioinformatics softwares. This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\ncalendar\r\n \r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/88/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/31/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/sigenae-text-black-1.png", "updated_at": "2025-05-09T13:20:15.323810Z", "type": "Training course", "start_date": "2025-12-15", "end_date": "2025-12-16", "venue": "", "city": "castanet-tolosan", "country": "France", "geographical_range": "National", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-05-09", "registration_closing": "2025-12-08", "registration_status": "closed", "courseMode": "Online" }, { "id": 723, "name": "Improve your command line skills by learning a few words of Perl - December 8 2025", "shortName": "One line Perl", "description": "This “Perl one-liners” training session is organized by the Sigenae platform. Perl one-liners are small and awesome Perl programs that fit in a single line of code and perform many operations such as replacing of text, spacing, deleting, calculation, manipulation in files and many more. This training will allow you to discover the power of Perl on the command line and learn how to use it to automate your file manipulations and command line generation with classical file formats such as tabulated text, fastq, sam/bam, and vcf.\r\n\r\nThis training lasts one day and is focused on practice. It consists of 3 parts with a large variety of exercises:\r\n\r\nIntroduction to Perl and its characteristics: Perl is a widely used programming language for data processing and task automation. We will introduce the main characteristics of Perl and discuss why it is particularly suited for biologists who want to manipulate files and generate command lines.\r\nPerl on the command line: we will show how to use Perl on the command line to perform common tasks, such as searching and replacing strings, merging files, and loop over lists of files.\r\nConcrete examples: we will present several concrete examples drawn from biology, such as extracting information from genomic sequence files, converting files between different formats, and generating command lines for data biology tools.\r\n \r\nThe session will take place in the room ‘salle de formation MIAT’ at INRAE center of Toulouse-Auzeville.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/onelineperl/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [], "keywords": [ "Perl Langage" ], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/88/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/31/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/sigenae-text-black-1.png", "updated_at": "2025-05-09T13:11:54.546597Z", "type": "Training course", "start_date": "2025-12-08", "end_date": "2025-12-08", "venue": "", "city": "castanet-tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-05-09", "registration_closing": "2025-12-01", "registration_status": "closed", "courseMode": "Online" }, { "id": 439, "name": "Annotation and analysis of prokaryotic genomes using the MicroScope platform - novembre 2022", "shortName": "MicroScope training - nov 2022", "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.", "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/", "is_draft": false, "costs": [ "2500 € for private companies", "1350 € for academics", "945 € for students" ], "topics": [ "http://edamontology.org/topic_0085", "http://edamontology.org/topic_3301", "http://edamontology.org/topic_0797" ], "keywords": [ "Genome analysis", "Sequence annotation" ], "prerequisites": [ "Licence" ], "openTo": "Everyone", "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. See : https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/external-microscope-professional-training-sessions/", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/90/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 15, "name": "Laboratory of Bioinformatics Analyses for Genomics and Metabolism", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Laboratory%20of%20Bioinformatics%20Analyses%20for%20Genomics%20and%20Metabolism/?format=api" } ], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 9, "name": "MicroScope", "url": "https://catalogue.france-bioinformatique.fr/api/team/MicroScope/?format=api" } ], "logo_url": null, "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2022-11-21", "end_date": "2022-11-25", "venue": "Evry University Paris Saclay", "city": "Evry", "country": "France", "geographical_range": "International", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-01-24", "registration_closing": "2022-10-20", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 507, "name": "Annotation and analysis of prokaryotic genomes using the MicroScope platform - November 2023", "shortName": "MicroScope training - November 2023", "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.", "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0085", "http://edamontology.org/topic_3301", "http://edamontology.org/topic_0797" ], "keywords": [ "Sequence analysis", "Microbial evolution", "Structural and functional annotation of genomes", "Sequence annotation" ], "prerequisites": [ "Licence" ], "openTo": "Everyone", "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. 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No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.", "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0085", "http://edamontology.org/topic_3301", "http://edamontology.org/topic_0797" ], "keywords": [], "prerequisites": [ "Licence" ], "openTo": "Everyone", "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. 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No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.", "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0085", "http://edamontology.org/topic_3301", "http://edamontology.org/topic_0797" ], "keywords": [], "prerequisites": [ "Licence" ], "openTo": "Everyone", "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. 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No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. 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