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            "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.",
            "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/",
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                    "id": 71,
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            "end_date": "2024-11-22",
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            "city": "Evry",
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        },
        {
            "id": 555,
            "name": "Linux for Dummies 2023",
            "shortName": "",
            "description": "This course offers an introduction to work with Linux. We will describe the Linux environment, the first linux commands so participants can start to utilize command-line tools and feel comfortable using bioinformatics softwares through a linux terminal",
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            "is_draft": false,
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                "Free"
            ],
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            "keywords": [],
            "prerequisites": [
                "none"
            ],
            "openTo": "Internal personnel",
            "accessConditions": "Open to South Green close collaborators",
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            ],
            "logo_url": "https://southgreenplatform.github.io/trainings//images/southgreenlong.png",
            "updated_at": "2023-12-04T15:37:57.131072Z",
            "type": "Training course",
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            "end_date": "2023-04-07",
            "venue": "",
            "city": "Montpellier",
            "country": "France",
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            "name": "Introduction to R Language",
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            "updated_at": "2022-06-02T11:50:50.627601Z",
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            "start_date": "2019-05-20",
            "end_date": null,
            "venue": "",
            "city": "CBiB",
            "country": "",
            "geographical_range": "",
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            "computingFacilities": [],
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            "registration_opening": null,
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        },
        {
            "id": 213,
            "name": "Genopole Summer School 2019",
            "shortName": "",
            "description": "Bioinformatic and Biostatistic tools in medical genomics",
            "homepage": "https://www.genopole.fr/spip.php",
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            "prerequisites": [],
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            ],
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            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2019-06-24",
            "end_date": "2019-06-28",
            "venue": "",
            "city": "Châteauform' Seine Port (77)",
            "country": "",
            "geographical_range": "",
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            "registration_opening": null,
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        },
        {
            "id": 268,
            "name": "Rôles multiples de l’ARN",
            "shortName": "",
            "description": "Ce cours théorique et pratique de deux semaines est orienté sur les méthodes pour étudier la synthèse, maturation et la dégradation d’une large variété de molécules d’ARN dans les cellules eucaryotes - voir plus\n",
            "homepage": "https://www.pasteur.fr/fr/enseignement/programmes-doctoraux-et-cours/cours-paste…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [
                "Analysis of RNAseq data",
                "Transcriptomics (RNA-seq)",
                "NGS Sequencing Data Analysis"
            ],
            "prerequisites": [
                "Master"
            ],
            "openTo": "Internal personnel",
            "accessConditions": "Les candidats doivent avoir de bonnes connaissances en génétique, biologie moléculaire et biochimie du niveau de la fin de première année de Master, ainsi qu’un niveau minimum (B1) en français ET en anglais. Les candidatures sont sélectionnées et évaluées par le Comité du cours.\n",
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            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2019-02-10",
            "end_date": "2019-02-21",
            "venue": "",
            "city": "institut Pasteur",
            "country": "",
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        },
        {
            "id": 533,
            "name": "Analyse primaire de données issues de séquenceurs nouvelle génération sous Galaxy",
            "shortName": "NGS Galaxy",
            "description": "Connaître les concepts et méthodes bioinformatiques utilisés pour l’analyse primaire de données issues de séquenceurs nouvelle génération (NGS).\r\nSavoir effectuer un alignement sur un génome de référence, un assemblage de novo d'un génome bactérien.",
            "homepage": "https://migale.inrae.fr/trainings/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [],
            "keywords": [
                "NGS Data Analysis",
                "Data visualization",
                "NGS"
            ],
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                "Galaxy - Basic usage"
            ],
            "openTo": "Everyone",
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            "maxParticipants": 10,
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                    "id": 82,
                    "name": "INRAE",
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                }
            ],
            "organisedByTeams": [
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                    "id": 10,
                    "name": "MIGALE",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=api"
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            ],
            "logo_url": "https://migale.inrae.fr/sites/default/files/migale-orange_0.png",
            "updated_at": "2023-05-26T14:16:02.157083Z",
            "type": "Training course",
            "start_date": "2023-06-15",
            "end_date": "2023-06-15",
            "venue": "Access to the INRAE center reception\r\n By car\r\n\r\n    Take the N118 from the Paris rotary Porte de Saint-Cloud > Pont de Sèvres > Follow direction Bordeaux/Nantes – take exit 6A Jouy-en-Josas/Bièvres\r\n    Take the N12 from Plaisir > Follow direction Paris exit 1 towards the D53\r\n    Take the A12 Rambouillet > Jouy – take exit 2 via the D446\r\n\r\n By the RER (train to the suburbs)\r\n\r\nRER C Line: Get off at the Jouy-en-Josas station. The research center is a 15 minute walk (you must walk towards the town hall (Mairie de Jouy).\r\n\r\n    From Chatelet-Les Halles, take the RER B line until the Massy-Palaiseau station (32 min.) then take the RER C line CIME train (14 min.)\r\n    From Versailles-Chantier RER C station take the VICK or VITY train (8 min.)\r\n    From the Bibliothèque François Mitterand RER C station, take the CIME train (1 hour)\r\n\r\n From the Orly Airport\r\n\r\nTake the bus « Paris par le train » to the Pont de Rungis RER C train station. Then take the RER C train CIME towards Versailles Chantiers. Get off at the Jouy-en-Josas station.\r\n\r\nStops of the “Paris par le train” bus :\r\n\r\n    Paris-Orly Sud : porte C, stop 6\r\n    Paris-Orly Ouest : porte G on the Arrivals level.\r\n\r\n From the Charles de Gaulle - Roissy Airport\r\n\r\nTo go from the Paris-Charles de Gaulle airport to Jouy-en-Josas you may take :\r\n\r\n    the RER B train towards St Remy les Chevreuses. Get off at the Massy Palaiseau station\r\n    the RER C train towards Versailles Chantiers (CIME trains). Get off at Jouy-en-Josas.",
            "city": "JOUY EN JOSAS Cedex",
            "country": "",
            "geographical_range": "",
            "trainers": [
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            ],
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            "realisation_status": "past",
            "registration_opening": "2023-05-25",
            "registration_closing": "2023-06-01",
            "registration_status": "closed",
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}