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            "name": "Analyse de données métagénomiques 16S",
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            "description": "\n\n\n\n\n\n\n\nObjectifs\nCette formation est dédiée à l'analyse de données de type \"métagénomique amplicon\" issues des technolo-gies de séquençage 454 et Illumina. La formation couvre les grandes étapes d'un pipeline d'analyse bioinformatique sous Galaxy (FROGS) pour transformer les séquences en tables d'abondances puis présente des outils statistiques sous R (phyloseq) qui permettent de décrire et comparer les échantillons à partir de ces tables.\n\n \nProgramme\n\nJours 1 et 2 : Analyses Bioinformatiques sous Galaxy\nIntroduction générale\nBrefs rappels sur l'environnement Galaxy\nPrésentation des données issues des différentes technologies de séquençage\nPrétraitement des données\nClustering des séquences, construction des OTUs\nDétection de chimères\nAnnotation taxonomique\nFiltrage des données de comptages\nOutils de visualisation\nConstruction de workflow et configuration de FROGS\nLimite des données et des méthodes \nJour 3 et 4 :  Analyses Statistiques sous Rstudio\nIntroduction générale\nImport, manipulation et visualisation des données\nMesure de diversités : Unifrac, Bray-Curtis, etc.\nOrdination et réduction de dimension : MDS\nClustering et Heatmap\nComparaison d'échantillons : PERMANOVA, adonis\n▫ Introduction générale\n▫ Brefs rappels sur l'environnement Galaxy\n▫ Présentation des données issues des différentes technologies de séquençage ▫ Prétraitement des données\n▫ Clustering des séquences, construction des OTUs\n▫ Détection de chimères\n▫ Annotation taxonomique\n▫ Filtrage des données de comptages\n▫ Outils de visualisation\n▫ Construction de workflow et configuration de FROGS\n▫ Limite des données et des méthodes\n\n\n\n\n\nJour 3 : Analyses Statistiques sous Rstudio\n\n\t▫  Introduction générale\n\t\n\n\t▫  Import et manipulation des données\n\t\n\n\t▫  Mesure de diversités : Unifrac, Bray-Curtis, etc.\n\t\n\n\t▫  Ordination et réduction de dimension : MDS\n\t\n\n\t▫  Clustering et Heatmap\n\t\n\n\t▫  Comparaison d'échantillons : PERMANOVA, adonis \n\t\n\n\n\n\n\n\n\n\n",
            "homepage": "http://migale.jouy.inra.fr/",
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            "name": "4th Workshop Single-Cell / SincellTE 2022 / Single-Cell : Transcriptomics, Spatial and Multi-Omics",
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            "updated_at": "2022-09-15T13:10:14.790898Z",
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            "end_date": "2022-01-14",
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            "name": "Manual curation of Transposable element annotation",
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            "description": "URGI organizes a BYOD-­style (Bring Your Own Data) training course on manual curation of transposable elements reference sequences obtained with REPET pipelines.\n",
            "homepage": "https://urgi.versailles.inra.fr/Platform/Training/Manual-curation-of-Transposabl…",
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            "updated_at": "2022-06-02T11:50:50.627601Z",
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            "end_date": "2019-02-05",
            "venue": "",
            "city": "URGI ­ INRA,  Bat 18 ­ Route de Saint­Cyr ­ RD10, 78026 Versailles Cedex",
            "country": "",
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        },
        {
            "id": 292,
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            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-10-17",
            "end_date": "2017-10-19",
            "venue": "",
            "city": "Villeurbanne",
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        },
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            "id": 168,
            "name": "Metagenomic: amplicons and stats",
            "shortName": "",
            "description": "Familiarization with the hardware infrastructure, biological data banks and widely used bioinformatics softwares ...",
            "homepage": "http://bioinfo.genotoul.fr/index.php/events/metagenomic-amplicons-and-stats-2/",
            "is_draft": false,
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            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-04-09",
            "end_date": "2018-04-12",
            "venue": "",
            "city": "Inra, 24 ch. de Borderouge, Auzeville",
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