Handles creating, reading and updating events.

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            "name": "Utilisation du cluster - SLURM / Cluster usage - SLURM - 2022 Session 2",
            "shortName": "Cluster SLURM - 2022 Session 2",
            "description": "Objectifs\r\n- Disposer des concepts et de bonnes pratiques d’utilisation des ressources de calcul.\r\n- Être capable d’utiliser les ressources de calcul de la plateforme en toute autonomie.\r\nProgramme\r\n- Introduction : les équipements (calcul et stockage), espaces de travail, les outils et les données.\r\n- Calcul parallèle : concepts, ressources\r\n- Soumission de jobs (srun, sbatch)\r\n- Monitorer, vérifier, controler les jobs (squeue, scontrol, scancel, sacct).\r\n- Base de l’optimisation d’un job\r\n- Solutions de parallélisation des jobs : (--array)",
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                "Linux - Basic Knowledge"
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                    "name": "SBR - Roscoff Marine Station",
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            "updated_at": "2023-05-17T09:55:11.578705Z",
            "type": "Training course",
            "start_date": "2022-11-23",
            "end_date": "2022-11-23",
            "venue": "Station Biologique de Roscoff",
            "city": "Roscoff",
            "country": "France",
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            "name": "Artificial Intelligence and Machine Learning in Life Sciences: from foundations to applications 2025",
            "shortName": "AI & ML in LS 2025",
            "description": "Artificial intelligence (AI) has permeated our lives, transforming how we live and work. Over the past few years, a rapid and disruptive acceleration of progress in AI has occurred, driven by significant advances in widespread data availability, computing power and machine learning. Remarkable strides were made in particular in the development of foundation models - AI models trained on extensive volumes of unlabelled data. Moreover, given the large amounts of omics data that are being generated and made accessible to researchers due to the drop in the cost of high-throughput technologies, analysing these complex high-volume data is not trivial, and the use of classical statistics can not explore their full potential. As such, Machine Learning (ML) and Artificial Intelligence (AI) have been recognized as key opportunity areas, as evidenced by a number of ongoing activities and efforts throughout the community.\r\n\r\nHowever, beyond the technological advances, it is equally important that the individual researchers acquire the necessary knowledge and skills to fully take advantage of Machine Learning. Being aware of the challenges, opportunities and constraints that ML applications entail, is a critical aspect in ensuring high quality research in life sciences.\r\n\r\nRecognizing this need, this week-long training will bring together experts from four ELIXIR Nodes and deliver a hands-on, high-intensity course available for members from all ELIXIR Nodes.\r\n\r\nLearners will be guided across the various steps in Machine Learning, from the foundational concepts, through the deep learning and generative AI techniques, closely complemented by insights into the existing reporting (DOME Recommendations) and regulatory frameworks (EU AI Act).\r\n\r\nThis 4-day school will involve around 10 trainers/helpers from across 4 different ELIXIR nodes and 30 participants from across all ELIXIR nodes. It will be hosted in France in May 2025.",
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                "Machine Learning basics",
                "Data analysis"
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            "updated_at": "2024-12-19T15:43:33.918124Z",
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            "start_date": "2025-05-19",
            "end_date": "2025-05-23",
            "venue": "CAES Centre Paul-Langevin",
            "city": "Aussois",
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            "name": "INTRODUCTION TO PYTHON 21-22 may 2025",
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            "description": "The Toulouse Genotoul bioinformatics platform, organizes a 2 days long training course for non computer scientist and biologists aiming at learning the foundation of Python programming. In this training you will learn the basics of programming (variables, functions, control structures such as “if” condition, “for” loop”), writing simple programs which read files, and write results to others. The training course does not require any knowledge in programming, but basic Linux/bash commands are required (cd, ls).\r\n\r\nThis training focuses on practice. It consists of modules with a large variety of exercises described hereunder (PROVISIONAL SCHEDULE):\r\n\r\nUsing a Jupyter notebook (Day 1).\r\nUsing variables (Day 1).\r\nBasic operations and functions (Day 1).\r\nReading a file, writing to a file (Day 1).\r\nCharacter string manipulation (Day 1).\r\nLists and dictionaries (Day 2).\r\nThe if and for controls (Day 2).\r\nBases of algorithms (Day 2).",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/python/",
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            ],
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            "updated_at": "2025-05-09T13:20:29.300103Z",
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            "start_date": "2025-05-21",
            "end_date": "2025-05-22",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
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            "id": 606,
            "name": "5th workshop Single-Cell : Transcriptomics, Spatial and Long reads",
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            "description": "This workshop focuses on the large-scale study of heterogeneity across individual cells from a genomic, transcriptomic and epigenomic point of view. New technological developments enable the characterization of molecular information at a single cell resolution for large numbers of cells. The high dimensional omics data that these technologies produce raise novel methodological challenges for the analysis. In this regard, dedicated bioinformatics and statistical methods have been developed in order to extract robust information.\r\n\r\nThe workshop aims to provide such methods for engineers and researchers directly involved in functional genomics projects making use of single-cell technologies. A wide range of single cell topics will be covered in lectures, demonstrations and practical classes. Among others, the areas and issues to be addressed will include the choice of the most appropriate single-cell sequencing technology, the experimental design and the bioinformatics and statistical methods and pipelines. For this edition, new courses/practicals will focus on spatial transcriptomics, cell phenotyping and additional multi-omics.\r\n\r\nA wide range of single cell topics will be covered in lectures, demonstrations and practical classes. Among others, the areas and issues to be addressed will include the choice of the most appropriate single-cell sequencing technology, the experimental design and the bioinformatics and statistical methods and pipelines. For this edition, new courses/practicals will focus on spatial transcriptomics, cell phenotyping and additional multi-omics.\r\n\r\nRequirements : Participants must have prior experience on NGS data analysis  with everyday use of R and good knowledge of Unix command line. Before the training, participants will be asked to familiarize themselves with the processing and primary analyses steps of scRNA-seq datasets with provided pedagogic material.\r\n\r\nIt is not necessary to have personal single-cell data to analyse.\r\n\r\nAll the classes will be taught in English",
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                "Autre (Diplôme universitaire, école d'ingénieur ...)"
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            "updated_at": "2024-03-20T16:00:20.423462Z",
            "type": "Training course",
            "start_date": "2024-10-20",
            "end_date": "2024-10-25",
            "venue": "Station Biologique",
            "city": "Roscoff",
            "country": "France",
            "geographical_range": "International",
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            "registration_opening": "2024-03-12",
            "registration_closing": "2024-05-07",
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        {
            "id": 194,
            "name": "WAVES Training 2018",
            "shortName": "",
            "description": "We organize a workshop to train users to WAVES, a Web Application for Versatile Enhanced Bioinformatic Services",
            "homepage": "",
            "is_draft": false,
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                    "name": "ATGC",
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            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/default_images/logo_ge_2.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-12-18",
            "end_date": null,
            "venue": "Institut Pasteur (Paris)",
            "city": "Paris",
            "country": "France",
            "geographical_range": "",
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            "id": 613,
            "name": "Les langages de workflows pour une analyse bioinformatique reproductible - session 2024 / Workflow languages for reproducible bioinformatics analysis -2024 session",
            "shortName": "WF4bioinfo 2024",
            "description": "L’Institut Français de Bioinformatique (IFB) organise en partenariat avec iPOP-UP (représenté par EDC) une formation sur les langages de workflows en bioinformatique à destination des bioinformaticien·ne·s et des bioanalystes. La formation abordera les fondamentaux et les fonctionnalités avancées des deux langages Snakemake et Nextflow. Ces outils sont en effet devenus indispensables pour assurer la reproductibilité et l’efficacité des analyses bioinformatiques. La formation sera structurée en deux séquences :\r\n- une journée commune qui abordera les grands principes des gestionnaires de workflow, en particulier dans le domaine de la bioinformatique et en lien avec les infrastructures de calcul de type cluster et cloud proposés au sein de l’IFB \r\n- une  journée de session pratique  avec 1 atelier snakemake et 1 atelier nextflow en parallèle au choix des participants. Nous proposons aux participants qui le souhaitent de travailler sur leur propre workflow dans une approche “Bring your own script” avec l’aide de l’équipe pédagogique.",
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                "http://edamontology.org/topic_0769",
                "http://edamontology.org/topic_0091"
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                "FAIR",
                "Reproducibility",
                "Nextflow",
                "Snakemake"
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                "Linux - Basic Knowledge"
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            "updated_at": "2024-03-28T10:04:12.722566Z",
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            "end_date": "2024-10-16",
            "venue": "",
            "city": "Paris",
            "country": "France",
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            "registration_opening": "2024-03-01",
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            "id": 726,
            "name": "Metagenomics and Metatranscriptomics initiation - 2025 session",
            "shortName": "Metagenomics 2025",
            "description": "Présentation de la formation\r\nA la demande du laboratoire d'Ecologie Microbienne de Lyon, l'équipe Formation de l'IFB organise une session de formation de deux jours sous Galaxy pour l'analyse de données de métagénomique et métatranscriptomique.\r\n\r\nObjectifs pédagogiques\r\nA la fin de cette formation, les participants auront \r\n\r\n- acquis des connaissances théoriques et pratiques sur les méthodes et objectifs d'une analyse en métagénomique et métatranscriptomique\r\n\r\n - réalisé une analyse de données de données métataxonomique, métagénomique shotgun et métatranscriptomique sous l'environnement Galaxy et sur des données fournies par l'équipe pédagogique\r\n\r\n- choisi et initié une analyse sur un jeu de données de leur choix en bénéficiant de l'encadrement de l'équipe pédagogique (Bring Your Own Data sessions)",
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                "http://edamontology.org/topic_3941",
                "http://edamontology.org/topic_3174",
                "http://edamontology.org/topic_0637"
            ],
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            "prerequisites": [
                "Galaxy - Basic usage"
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            "updated_at": "2025-07-16T11:47:31.510580Z",
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            "start_date": "2025-06-17",
            "end_date": "2025-06-18",
            "venue": "",
            "city": "Villeurbanne",
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            "id": 737,
            "name": "H2020-AGENT Datathon on experimental phenotypic data management using the FAIRDOM platform - 2022",
            "shortName": "FAIRDOM 2022",
            "description": "Datathon on experimental phenotypic data management using the FAIRDOM platform, and submission workflow using curation & validation tools.",
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                "http://edamontology.org/topic_3365",
                "http://edamontology.org/topic_3366",
                "http://edamontology.org/topic_3572",
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            "updated_at": "2025-09-13T13:27:15.246574Z",
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            "end_date": "2022-04-13",
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                "Non-academic: 550€ + 20% taxes (TVA)",
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            "topics": [],
            "keywords": [
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            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2023-05-17T10:03:41.882770Z",
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            "start_date": "2023-11-28",
            "end_date": "2023-11-28",
            "venue": "",
            "city": "Toulouse-Auzeville",
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            "registration_opening": "2023-04-04",
            "registration_closing": "2023-11-22",
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            "id": 788,
            "name": "Advanced Python - 2026",
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            "homepage": "https://documents.migale.inrae.fr/trainings.html",
            "is_draft": false,
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            "topics": [
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            ],
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                },
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                    "id": 88,
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            ],
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            "end_date": "2026-06-04",
            "venue": "",
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            "homepage": "https://abims.sb-roscoff.fr/training/courses",
            "is_draft": false,
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            "updated_at": "2023-05-17T09:54:49.847679Z",
            "type": "Training course",
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            "end_date": "2022-11-24",
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        },
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            ],
            "logo_url": "https://abims.sb-roscoff.fr/sites/default/files/abims.png",
            "updated_at": "2025-02-21T08:52:21.853835Z",
            "type": "Training course",
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            "end_date": "2025-05-19",
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            "country": "France",
            "geographical_range": "",
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            "registration_opening": "2025-02-09",
            "registration_closing": "2025-04-30",
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        },
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            "homepage": "https://ressources.france-bioinformatique.fr/fr/evenements/EBAI2018",
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            ],
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                    "id": 4,
                    "name": "ABiMS",
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                },
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                    "id": 29,
                    "name": "IFB Core",
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                    "name": "TAGC-BU",
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                    "id": 22,
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            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
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            "end_date": "2018-11-30",
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        },
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            ],
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            "updated_at": "2024-03-21T15:53:33.771360Z",
            "type": "Training course",
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            "end_date": "2024-07-02",
            "venue": "CNRS - Délégation Provence et corse, 31 Chemin Joseph Aiguier, 13009 Marseille.",
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            "country": "France",
            "geographical_range": "",
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        },
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            "homepage": "https://abims.sb-roscoff.fr/ateliers/2025",
            "is_draft": false,
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            ],
            "topics": [
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            ],
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            "updated_at": "2025-02-21T08:52:06.958401Z",
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            "end_date": "2025-05-20",
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            "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.",
            "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/",
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            "logo_url": "https://labgem.genoscope.cns.fr/wp-content/uploads/2019/06/MicroScope_logo-300x210.png",
            "updated_at": "2026-03-26T14:14:19.457285Z",
            "type": "Training course",
            "start_date": "2026-12-07",
            "end_date": "2026-12-11",
            "venue": "",
            "city": "Evry",
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        },
        {
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            "description": "Genopole et ses partenaires institutionnels lancent la 5e session de l’école thématique « Bioinformatique et biostatistiques pour la génomique en santé »\r\nCette formation est dédiée aux chercheurs, ingénieurs et doctorants et dispensée en anglais par des experts internationaux de la génomique.\r\nLes points forts de la formation :\r\n\r\n    Des sessions de formation pratiques aux outils d’analyse génomique\r\n    Des experts des grands centres nationaux et internationaux (Université d’Evry – Paris-Saclay, Inrae, CEA, CNRS, Université du Luxembourg, EMBL-EBI)\r\n    Format résidentiel tout inclus dans un cadre accueillant et propice au networking\r\n    Effectif limité à 15 participants pour une qualité optimale des sessions pratiques\r\n    Formation éligible à la prise en charge employeurs ou OPCO",
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            "updated_at": "2022-11-14T16:43:03.315741Z",
            "type": "Training course",
            "start_date": "2022-11-21",
            "end_date": "2022-11-24",
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            "geographical_range": "",
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            "registration_closing": "2022-11-19",
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        },
        {
            "id": 507,
            "name": "Annotation and analysis of prokaryotic genomes using the MicroScope platform - November 2023",
            "shortName": "MicroScope training - November 2023",
            "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.",
            "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/",
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                "http://edamontology.org/topic_3301",
                "http://edamontology.org/topic_0797"
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            "keywords": [
                "Sequence analysis",
                "Microbial evolution",
                "Structural and functional annotation of genomes",
                "Sequence annotation"
            ],
            "prerequisites": [
                "Licence"
            ],
            "openTo": "Everyone",
            "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. See : https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/external-microscope-professional-training-sessions/",
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            "sponsoredBy": [
                {
                    "id": 15,
                    "name": "Laboratory of Bioinformatics Analyses for Genomics and Metabolism",
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                }
            ],
            "organisedByOrganisations": [
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                    "id": 67,
                    "name": "University Paris-Saclay",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/University%20Paris-Saclay/?format=api"
                }
            ],
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                    "id": 9,
                    "name": "MicroScope",
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            "logo_url": "https://labgem.genoscope.cns.fr/wp-content/uploads/2021/06/GENOSCOPE-LABGeM.jpg",
            "updated_at": "2023-05-17T09:52:54.208192Z",
            "type": "Training course",
            "start_date": "2023-12-04",
            "end_date": "2023-12-08",
            "venue": "",
            "city": "Evry",
            "country": "France",
            "geographical_range": "",
            "trainers": [],
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            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": "2023-11-05",
            "registration_status": "closed",
            "courseMode": "Onsite"
        },
        {
            "id": 713,
            "name": "Linux Avancé / Advanced Linux",
            "shortName": "Advanced Linux",
            "description": "Objectifs\r\n- Savoir utiliser des commandes linux pour traiter de grosses quantités de données : fichiers\r\nvolumineux et/ou en grands nombres : recherche, comptage, tri, fusion, …\r\nProgramme\r\n- Introduction\r\n- Décrire (wc, grep)\r\n- Manipuler des fichiers tabulés (cut, sort)\r\n- Rechercher (grep)\r\n- Redirection / Pipeline (stdin, stdout, stderr, >, 2>, &&, |)\r\n- Recherche avancée : notion d’expression régulière (egrep)\r\n- Rechercher/Remplacer haut débit (tr, sed)\r\n- Manipulation de fichier tabulé – mode avancé (awk)\r\n- Traitement séquentiel de nombreux fichiers (for)",
            "homepage": "https://abims.sb-roscoff.fr/ateliers/2025",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [
                "http://edamontology.org/topic_3316"
            ],
            "keywords": [],
            "prerequisites": [
                "Linux - Basic Knowledge"
            ],
            "openTo": "Everyone",
            "accessConditions": "Preregistration required using: https://abims.sb-roscoff.fr/ateliers/preinscription",
            "maxParticipants": 18,
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                    "id": 65,
                    "name": "SBR - Roscoff Marine Station",
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            ],
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            ],
            "logo_url": "https://abims.sb-roscoff.fr/sites/default/files/abims.png",
            "updated_at": "2025-02-21T08:52:39.134624Z",
            "type": "Training course",
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            "end_date": "2025-05-15",
            "venue": "",
            "city": "Roscoff",
            "country": "France",
            "geographical_range": "",
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            "registration_closing": "2025-04-30",
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        },
        {
            "id": 636,
            "name": "How To Run a NF-Core Nextflow Workflow On Genotoul ? - session 12/11/2024",
            "shortName": "Nextflow/nf-core - session 12/11/2024",
            "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning nf-core workflow submission, error understanding, resuming jobs and ressource reservation. We will present and practice:\r\n\r\nthe Nextflow software\r\nthe nf-core community and pipelines\r\nWhat is a singularity image ?\r\nWhere are installed the nf-core workflows ? Which version do I use ?\r\nHow to run a workflow and which config file is used ?\r\nWhich kind of error I can get ?\r\nHow to resume failed jobs?\r\nHow to handle genome indexes ?\r\nHow to monitor my process and then well configure my workflow ?\r\nHow do you best adjust CPU and RAM reservations?\r\nThis is NOT a bioinformatic training on a particular workflow or a training on how to develop a workflow.\r\n\r\nThis training is focused on practice. It consists of several modules with a large variety of exercises:\r\n\r\nStart at 09:00 am\r\nEnd at 17:00 pm",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/how-to-run-a-nf-core-nextflow-workflow-on-genotoul-2/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
                "http://edamontology.org/topic_0769"
            ],
            "keywords": [
                "Nextflow"
            ],
            "prerequisites": [
                "Linux/Unix",
                "Cluster"
            ],
            "openTo": "Everyone",
            "accessConditions": "",
            "maxParticipants": 12,
            "contacts": [
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                    "name": "MIAT",
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                }
            ],
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                    "id": 22,
                    "name": "Genotoul-bioinfo",
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                }
            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2024-06-10T12:38:11.016801Z",
            "type": "Training course",
            "start_date": "2024-11-12",
            "end_date": "2024-11-12",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "",
            "trainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api",
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            ],
            "trainingMaterials": [
                {
                    "id": 143,
                    "name": "Workflows nf-core - Genotoul-bioinfo",
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                }
            ],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": "2024-06-05",
            "registration_closing": "2024-11-06",
            "registration_status": "closed",
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        }
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}