Event List
Handles creating, reading and updating events.
GET /api/event/?format=api&offset=560&ordering=-city
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It consists of 3 modules with a large variety of exercises:\r\n\r\n- Connect to « genotoul » server (09:00 am to 10:30 am): Platform presentation, Linux basics, opening an user account, Putty installation, first connection.\r\n- Files and basics commands (10:45 am to 12:00 pm): types of files and secure access, file manipulation commands, text editors and viewers, disk space management .\r\n- Transfers and file manipulation (14:00 pm to 17:00 pm): download/transfer, compress/uncompress, utility commands and data extraction, output redirections.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/linux-2-2/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/344/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/739/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2026-02-02T09:40:36.591559Z", "type": "Training course", "start_date": "2026-03-24", "end_date": "2026-02-24", "venue": "", "city": "Castanet-Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [ { "id": 137, "name": "Linux slides - Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Linux%20slides%20-%20Genotoul-bioinfo/?format=api" }, { "id": 138, "name": "Linux TP - Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Linux%20TP%20-%20Genotoul-bioinfo/?format=api" } ], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2026-01-14", "registration_closing": "2026-02-10", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 756, "name": "SHORT-READ ALIGNMENT AND SMALL SIZE VARIANTS CALLING - 13 avril 2026", "shortName": "", "description": "This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).\r\n \r\nThe session will take place in the room ‘salle de formation’ at INRAE center of Toulouse-Auzeville.\r\n\r\nPrerequisites: ability to use a Unix environment (see Unix training) and Cluster (see Cluster training).\r\n \r\nTool box: FastQC, BWA, Samtools, Picard tools, GATK, SnpSift / SnpEff, IGV.", "homepage": "https://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-calling/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_0102", "http://edamontology.org/topic_2885" ], "keywords": [], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "https://bioinfo.genotoul.fr/wp-content/uploads/sigenae-text-black-1.png", "updated_at": "2026-02-02T09:47:33.747044Z", "type": "Training course", "start_date": "2026-04-13", "end_date": "2026-04-14", "venue": "", "city": "Castanet-Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2026-01-14", "registration_closing": "2026-02-27", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 757, "name": "INTRODUCTION TO PYTHON - 20 avril 2026", "shortName": "Python - 20 avril 2026", "description": "The Toulouse Genotoul bioinformatics platform, organizes a 2 days long training course for non computer scientist and biologists aiming at learning the foundation of Python programming. In this training you will learn the basics of programming (variables, functions, control structures such as “if” condition, “for” loop”), writing simple programs which read files, and write results to others. The training course does not require any knowledge in programming, but basic Linux/bash commands are required (cd, ls).\r\n\r\nThis training focuses on practice. It consists of modules with a large variety of exercises described hereunder (PROVISIONAL SCHEDULE):\r\n\r\nUsing a Jupyter notebook (Day 1).\r\nUsing variables (Day 1).\r\nBasic operations and functions (Day 1).\r\nReading a file, writing to a file (Day 1).\r\nCharacter string manipulation (Day 1).\r\nLists and dictionaries (Day 2).\r\nThe if and for controls (Day 2).\r\nBases of algorithms (Day 2).", "homepage": "https://bioinfo.genotoul.fr/index.php/events/python/", "is_draft": false, "costs": [], "topics": [ "http://edamontology.org/topic_3307" ], "keywords": [ "Python Language" ], "prerequisites": [ "Linux/Unix" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/642/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 15, "name": "MIAT", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2026-02-02T09:50:06.789625Z", "type": "Training course", "start_date": "2026-04-20", "end_date": "2026-04-21", "venue": "", "city": "Castanet-Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [ { "id": 142, "name": "Introduction to python - Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Introduction%20to%20python%20-%20Genotoul-bioinfo/?format=api" } ], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2026-01-14", "registration_closing": "2026-03-06", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 755, "name": "HOW TO RUN A NF-CORE NEXTFLOW WORKFLOW ON GENOTOUL ? - 7 avril 2026", "shortName": "Nextflow/nf-core - 7 avril 2026", "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning nf-core workflow submission, error understanding, resuming jobs and ressource reservation. We will present and practice:\r\n\r\nthe Nextflow software\r\nthe nf-core community and pipelines\r\nWhat is a singularity image ?\r\nWhere are installed the nf-core workflows ? Which version do I use ?\r\nHow to run a workflow and which config file is used ?\r\nWhich kind of error I can get ?\r\nHow to resume failed jobs?\r\nHow to handle genome indexes ?\r\nHow to monitor my process and then well configure my workflow ?\r\nHow do you best adjust CPU and RAM reservations?\r\nThis is NOT a bioinformatic training on a particular workflow or a training on how to develop a workflow.\r\n\r\nThis training is focused on practice. It consists of several modules with a large variety of exercises:\r\n\r\nStart at 09:00 am\r\nEnd at 17:00 pm", "homepage": "https://bioinfo.genotoul.fr/index.php/events/how-to-run-a-nf-core-nextflow-workflow-on-genotoul-2/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_0769" ], "keywords": [ "Nextflow" ], "prerequisites": [ "Linux/Unix", "Cluster" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 15, "name": "MIAT", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2026-02-02T09:45:21.771804Z", "type": "Training course", "start_date": "2026-04-07", "end_date": "2026-04-07", "venue": "", "city": "Castanet-Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [ { "id": 143, "name": "Workflows nf-core - Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Workflows%20nf-core%20-%20Genotoul-bioinfo/?format=api" } ], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2026-01-14", "registration_closing": "2026-02-21", "registration_status": "closed", "courseMode": "Onsite" } ] }
