Handles creating, reading and updating events.

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            "name": "Using sed and awk to modify large large text files - 13 March 2025",
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            "description": "Many analysis generate large result text files which have to be checked, merged, split, reduced. Several tools have been developed and are available on Unix to do this, including sed and AWK. During this course you will be trained to process large files with sed and AWK. Sed is tool enabling to select and process lines. You can easily insert, delete, modify, append lines to very large files with millions of lines. AWK will enable to perform more fine tuned file modifications based on columns. It includes also more mathematical and string functions.  The course is based mainly on exercises with small sections presenting concepts and commands.",
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            "name": "Improve your command line skills by learning a few words of Perl - session 28/11/2023",
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            "description": "This “Perl one-liners” training session is organized by the Sigenae platform. Perl one-liners are small and awesome Perl programs that fit in a single line of code and perform many operations such as replacing of text, spacing, deleting, calculation, manipulation in files and many more. This training will allow you to discover the power of Perl on the command line and learn how to use it to automate your file manipulations and command line generation with classical file formats such as tabulated text, fastq, sam/bam, and vcf.\r\n\r\nThis training lasts one day and is focused on practice. It consists of 3 parts with a large variety of exercises:\r\n\r\nIntroduction to Perl and its characteristics: Perl is a widely used programming language for data processing and task automation. We will introduce the main characteristics of Perl and discuss why it is particularly suited for biologists who want to manipulate files and generate command lines.\r\nPerl on the command line: we will show how to use Perl on the command line to perform common tasks, such as searching and replacing strings, merging files, and loop over lists of files.\r\nConcrete examples: we will present several concrete examples drawn from biology, such as extracting information from genomic sequence files, converting files between different formats, and generating command lines for data biology tools.\r\n \r\nThe session will take place in the room ‘salle de formation MIAT’ at INRAE center of Toulouse-Auzeville.",
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            "updated_at": "2023-05-17T10:03:41.882770Z",
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            "name": "How To Run a NF-Core Nextflow Workflow On Genotoul ? - session 12/11/2024",
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            "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning nf-core workflow submission, error understanding, resuming jobs and ressource reservation. We will present and practice:\r\n\r\nthe Nextflow software\r\nthe nf-core community and pipelines\r\nWhat is a singularity image ?\r\nWhere are installed the nf-core workflows ? Which version do I use ?\r\nHow to run a workflow and which config file is used ?\r\nWhich kind of error I can get ?\r\nHow to resume failed jobs?\r\nHow to handle genome indexes ?\r\nHow to monitor my process and then well configure my workflow ?\r\nHow do you best adjust CPU and RAM reservations?\r\nThis is NOT a bioinformatic training on a particular workflow or a training on how to develop a workflow.\r\n\r\nThis training is focused on practice. It consists of several modules with a large variety of exercises:\r\n\r\nStart at 09:00 am\r\nEnd at 17:00 pm",
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            "updated_at": "2024-06-10T12:38:11.016801Z",
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            "name": "RNASEQ ALIGNMENT, QUANTIFICATION AND TRANSCRIPT DISCOVERY WITH STATISTICS - session 14 - 17 /05/2024",
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            "description": "The Toulouse Genotoul bioinformatics platform, in collaboration with the Genotoul Biostatistics platform, and the MIAT unit, organize a 3,5 days long training course for bio-informaticians and biologists aiming at learning sequence analysis. It focuses on (protein coding) gene expression analysis using reads produced by ‘RNA-Seq’. This training session is designed to introduce sequences from ‘NGS’ (Next Generation Sequencing), particularly Illumina platforms (HiSeq). You will discover the standards file formats, learn about the usual biases of this type of data and run different kinds of analyses, such as spliced alignment on a reference genome, novel gene and transcript discovery, expression quantification of coding genes and transcripts. Finally you will be able to extract the differentially expressed genes.",
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            "updated_at": "2024-03-26T14:25:27.655655Z",
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            "id": 635,
            "name": "Introduction To Python - session 16/10/2024 - 17/10/2024",
            "shortName": "Introduction To Python - session 16/10/2024 - 17/10/2024",
            "description": "The Toulouse Genotoul bioinformatics platform, organizes a 2 days long training course for non computer scientist and biologists aiming at learning the foundation of Python programming. In this training you will learn the basics of programming (variables, functions, control structures such as “if” condition, “for” loop”), writing simple programs which read files, and write results to others. The training course does not require any knowledge in programming, but basic Linux/bash commands are required (cd, ls).\r\n\r\nThis training focuses on practice. It consists of modules with a large variety of exercises described hereunder (PROVISIONAL SCHEDULE):\r\n\r\nUsing a Jupyter notebook (Day 1).\r\nUsing variables (Day 1).\r\nBasic operations and functions (Day 1).\r\nReading a file, writing to a file (Day 1).\r\nCharacter string manipulation (Day 1).\r\nLists and dictionaries (Day 2).\r\nThe if and for controls (Day 2).\r\nBases of algorithms (Day 2).",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/python/",
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                "http://edamontology.org/topic_3307"
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            "updated_at": "2024-06-10T12:33:57.629350Z",
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            "id": 530,
            "name": "Short-Read Alignment And Small Size Variants Calling - session 13/11/2023 - 14/11/2023",
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            "description": "This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).\r\n \r\nThe session will take place in the room ‘salle de formation’ at INRAE center of Toulouse-Auzeville.\r\n\r\nPrerequisites: ability to use a Unix environment (see Unix training) and Cluster (see Cluster training).\r\n \r\nTool box: FastQC, BWA, Samtools, Picard tools, GATK, SnpSift / SnpEff, IGV.",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-calling/",
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                "http://edamontology.org/topic_0102",
                "http://edamontology.org/topic_2885"
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            "updated_at": "2024-06-10T12:36:44.820913Z",
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            "start_date": "2023-11-13",
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            "id": 670,
            "name": "Analysis of shotgun metagenomic data - May 2025",
            "shortName": "",
            "description": "This training session is organized by the Genotoul bioinfo platform. This course is dedicated to the analysis of prokaryotic shotgun metagenomic data from Illumina and Pacbio HiFi sequencing technology. \r\n\r\nAfter an overview of metagenomics and the biases and limitations of analyses, we will look at the main steps involved in analysing metagenomic data and launch independent tools on the genobioinfo cluster.\r\nLearners will then test a workflow to automate processing on a test dataset (metagWGS ).\r\nOn the third day, learners will choose which analysis strategy to start with according to their experimental design and launch the first stage of metagWGS on their own data.\r\nBy the end of the course, trainees will be familiar with the scope, advantages and limitations of shotgun sequencing data analysis and will have started the analysis on their own data.\r\n\r\ncalendar\r\n \r\n\r\nThis training is focused on practice. It consists of several modules with a large variety of exercises:\r\n\r\nFirst Day\r\nStart at 09:00 am\r\nTour de table\r\nIntroduction to metagenomics, Illumina and Pacbio data, analysis stages, analysis limits, etc.\r\nPresentation of some key tools for each stage\r\nPractical work on the main stages launched independently\r\nEnd at 17:00 pm\r\nSecond Day\r\nStart at 09:00 am\r\nIntroduction to the advantages and disadvantages of workflows and containers\r\nLaunch of the data cleansing stage\r\nLaunch of the rest of the workflow and analysis of the multiQC report\r\nEnd at 17:00 pm\r\nThird Day – BYOD\r\nStart at 09:00 am\r\nDefine the analysis strategy and launch the start of the analysis of your own data.\r\nEnd at 17:00 pm maximum",
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            "costs": [
                "Non-academic for non-academic: 1650€ + 20% taxes (TVA)",
                "Academic non-INRAE for academic but non-INRAE: 510 € + 20% taxes (TVA)",
                "INRAE for INRAE's staff: 450 € no VAT charged"
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            "realisation_status": "past",
            "registration_opening": "2024-12-06",
            "registration_closing": "2025-04-23",
            "registration_status": "closed",
            "courseMode": "Onsite"
        },
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            "id": 719,
            "name": "LINUX - Novembre 18 2025",
            "shortName": "",
            "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning sequence analysis. This training session has been designed to familiarize yourself with the platform resources and its organization. You will learn to access the platform from your work station, what is an Linux environment and how to use it, how to create and manipulate files, how to transfer them from and to your personal computer.\r\n\r\nThis training is focused on practice. It consists of 3 modules with a large variety of exercises:\r\n\r\n- Connect to « genotoul » server (09:00 am to 10:30 am): Platform presentation, Linux basics, opening an user account, Putty installation, first connection.\r\n- Files and basics commands  (10:45 am to 12:00 pm): types of files and secure access, file manipulation commands, text editors and viewers, disk space management .\r\n- Transfers and file manipulation (14:00 pm to 17:00 pm): download/transfer, compress/uncompress, utility commands and data extraction, output redirections.",
            "homepage": "http://bioinfo.genotoul.fr/index.php/events/linux-2-2/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
                "http://edamontology.org/topic_3316"
            ],
            "keywords": [],
            "prerequisites": [
                "none"
            ],
            "openTo": "Everyone",
            "accessConditions": "",
            "maxParticipants": 10,
            "contacts": [
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                    "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api"
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            ],
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                    "id": 22,
                    "name": "Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api"
                }
            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2025-05-09T13:20:41.290573Z",
            "type": "Training course",
            "start_date": "2025-11-18",
            "end_date": "2025-11-18",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "",
            "trainers": [],
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                    "id": 137,
                    "name": "Linux slides - Genotoul-bioinfo",
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            ],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": "2025-05-09",
            "registration_closing": "2025-11-11",
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        },
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            "name": "Cluster - November 19 2025",
            "shortName": "",
            "description": "This training session is designed to help you deal with the platform compute cluster and data banks. You will launch your first processing batch on the cluster and will learn how to track and manage them. Organized jointly by the Sigenae and bioinfo genotoul platforms.",
            "homepage": "http://bioinfo.genotoul.fr/index.php/events/cluster-2/",
            "is_draft": false,
            "costs": [
                "Priced",
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
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            "keywords": [
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                "Cluster"
            ],
            "prerequisites": [
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            ],
            "openTo": "Everyone",
            "accessConditions": "You need to register (via the website) and pay 170 euros a day for academic and 550 euros a day for a private.",
            "maxParticipants": 12,
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            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2025-05-09T13:20:51.071696Z",
            "type": "Training course",
            "start_date": "2025-11-19",
            "end_date": "2025-11-19",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "",
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                    "id": 140,
                    "name": "Cluster TP - Genotoul-bioinfo",
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            "registration_closing": "2025-11-12",
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        },
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            "id": 722,
            "name": "HOW TO RUN A NF-CORE NEXTFLOW WORKFLOW ON GENOTOUL ? December 1er 2025",
            "shortName": "Nextflow/nf-core",
            "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning nf-core workflow submission, error understanding, resuming jobs and ressource reservation. We will present and practice:\r\n\r\nthe Nextflow software\r\nthe nf-core community and pipelines\r\nWhat is a singularity image ?\r\nWhere are installed the nf-core workflows ? Which version do I use ?\r\nHow to run a workflow and which config file is used ?\r\nWhich kind of error I can get ?\r\nHow to resume failed jobs?\r\nHow to handle genome indexes ?\r\nHow to monitor my process and then well configure my workflow ?\r\nHow do you best adjust CPU and RAM reservations?\r\nThis is NOT a bioinformatic training on a particular workflow or a training on how to develop a workflow.\r\n\r\nThis training is focused on practice. It consists of several modules with a large variety of exercises:\r\n\r\nStart at 09:00 am\r\nEnd at 17:00 pm",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/how-to-run-a-nf-core-nextflow-workflow-on-genotoul-2/",
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                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
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            ],
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            ],
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            ],
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            "accessConditions": "",
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                    "name": "Genotoul-bioinfo",
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            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2025-05-09T13:20:57.741969Z",
            "type": "Training course",
            "start_date": "2025-12-01",
            "end_date": "2025-12-01",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [
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                    "id": 143,
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            ],
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            "realisation_status": "past",
            "registration_opening": "2025-05-09",
            "registration_closing": "2025-11-24",
            "registration_status": "closed",
            "courseMode": "Online"
        },
        {
            "id": 721,
            "name": "RNASEQ ALIGNMENT, QUANTIFICATION AND TRANSCRIPT DISCOVERY WITH STATISTICS - 24-27 November  2025",
            "shortName": "RNASeq bioinfo / biostat",
            "description": "The Toulouse Genotoul bioinformatics platform, in collaboration with the Genotoul Biostatistics platform, and the MIAT unit, organize a 3,5 days long training course for bio-informaticians and biologists aiming at learning sequence analysis. It focuses on (protein coding) gene expression analysis using reads produced by ‘RNA-Seq’. This training session is designed to introduce sequences from ‘NGS’ (Next Generation Sequencing), particularly Illumina platforms (HiSeq). You will discover the standards file formats, learn about the usual biases of this type of data and run different kinds of analyses, such as spliced alignment on a reference genome, novel gene and transcript discovery, expression quantification of coding genes and transcripts. Finally you will be able to extract the differentially expressed genes.",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/rnaseq-alignment-transcripts-assemblies-statistics/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
                "http://edamontology.org/topic_3308",
                "http://edamontology.org/topic_0203"
            ],
            "keywords": [
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                "Expression"
            ],
            "prerequisites": [
                "Langage R de base",
                "Linux/Unix",
                "Cluster"
            ],
            "openTo": "Everyone",
            "accessConditions": "Register on the training page : https://bioinfo.genotoul.fr/index.php/training-2/training/\r\nNon-academic\r\nfor non-academic: 550€ + 20% taxes (TVA) per day\t€2 200,00\t\r\n\r\nAcademic non-INRAE\r\nfor academic but non-INRAE: 170 € + 20% taxes (TVA) per day\t€680,00\t\r\n\r\nINRAE\r\nfor INRAE's staff: 150 € no VAT charged per day;\t€600,00",
            "maxParticipants": 12,
            "contacts": [
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                }
            ],
            "organisedByTeams": [
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                    "id": 33,
                    "name": "Genotoul-biostat",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-biostat/?format=api"
                },
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                    "id": 22,
                    "name": "Genotoul-bioinfo",
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            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2025-05-09T13:21:03.858451Z",
            "type": "Training course",
            "start_date": "2025-11-24",
            "end_date": "2025-11-27",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "National",
            "trainers": [],
            "trainingMaterials": [
                {
                    "id": 135,
                    "name": "Training RNASeq - bioinfo part - Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Training%20RNASeq%20-%20bioinfo%20part%20-%20Genotoul-bioinfo/?format=api"
                },
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                    "id": 136,
                    "name": "Training RNASeq - biostat part - Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Training%20RNASeq%20-%20biostat%20part%20-%20Genotoul-bioinfo/?format=api"
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            ],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": "2025-05-09",
            "registration_closing": "2025-11-17",
            "registration_status": "closed",
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        },
        {
            "id": 718,
            "name": "INTRODUCTION TO PYTHON 21-22 may 2025",
            "shortName": "Python May 2025",
            "description": "The Toulouse Genotoul bioinformatics platform, organizes a 2 days long training course for non computer scientist and biologists aiming at learning the foundation of Python programming. In this training you will learn the basics of programming (variables, functions, control structures such as “if” condition, “for” loop”), writing simple programs which read files, and write results to others. The training course does not require any knowledge in programming, but basic Linux/bash commands are required (cd, ls).\r\n\r\nThis training focuses on practice. It consists of modules with a large variety of exercises described hereunder (PROVISIONAL SCHEDULE):\r\n\r\nUsing a Jupyter notebook (Day 1).\r\nUsing variables (Day 1).\r\nBasic operations and functions (Day 1).\r\nReading a file, writing to a file (Day 1).\r\nCharacter string manipulation (Day 1).\r\nLists and dictionaries (Day 2).\r\nThe if and for controls (Day 2).\r\nBases of algorithms (Day 2).",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/python/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
                "http://edamontology.org/topic_3307"
            ],
            "keywords": [
                "Python Language"
            ],
            "prerequisites": [
                "Linux/Unix"
            ],
            "openTo": "Everyone",
            "accessConditions": "Non-academic\r\nfor non-academic: 550€ + 20% taxes (TVA) per day\t€1 100,00\t\r\n\r\nAcademic non-INRAE\r\nfor academic but non-INRAE: 170 € + 20% taxes (TVA) per day\t€340,00\t\r\n\r\nINRAE\r\nfor INRAE's staff: 150 € no VAT charged per day",
            "maxParticipants": 12,
            "contacts": [
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            ],
            "elixirPlatforms": [],
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            "organisedByOrganisations": [
                {
                    "id": 15,
                    "name": "MIAT",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT/?format=api"
                }
            ],
            "organisedByTeams": [
                {
                    "id": 22,
                    "name": "Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api"
                }
            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2025-05-09T13:20:29.300103Z",
            "type": "Training course",
            "start_date": "2025-05-21",
            "end_date": "2025-05-22",
            "venue": "",
            "city": "castanet-tolosan",
            "country": "France",
            "geographical_range": "National",
            "trainers": [],
            "trainingMaterials": [
                {
                    "id": 142,
                    "name": "Introduction to python - Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Introduction%20to%20python%20-%20Genotoul-bioinfo/?format=api"
                }
            ],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": "2025-05-09",
            "registration_closing": "2025-05-14",
            "registration_status": "closed",
            "courseMode": "Onsite"
        },
        {
            "id": 310,
            "name": "Cluster - Usage ",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
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            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-05-17",
            "end_date": null,
            "venue": "",
            "city": "Roscoff",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
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            "courseMode": null
        },
        {
            "id": 389,
            "name": "Metabarcoding analyses (using FROGS in Galaxy and Phyloseq)",
            "shortName": "",
            "description": "This course offers an introduction to metabarcoding analyses at two different levels/steps: bioinformatics with FROGS pipeline in the Galaxy environment, biostatistics with PhyloSeq R package. This includes preprocessing, clustering and OTU picking, taxonomic assignation, estimation of diversity, visualization of statistics results.\nPrerequisites\nGalaxy, R knowledge\n\nProgram\nIntroduction to metagenomics and metabarcoding\nPre-processing, Clustering, taxonomic affiliation (FROGS)\nHandling and visualizing OTU table using PhyloSeq R package (PhyloSeq)\n\n\nLearning objectives\nManipulate tools available for metabarcoding analysis\nStudy sample diversity by using NGS and post-NGS analysis tools\nVisualize diversity metrics in metabarcoding approach​\n\n\nInstructors\nJulie Orjuela - julie.orjuela@ird.fr\nFlorentin Constancias - florentin.constancias@cirad.fr\nAlexis Dereeper - alexis.dereeper@ird.fr\n\n \n",
            "homepage": "https://southgreenplatform.github.io/trainings//metabarcoding/",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
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                    "id": 24,
                    "name": "South Green",
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                }
            ],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-04-22",
            "end_date": null,
            "venue": "",
            "city": "Centre IRD, Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
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        },
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            "id": 330,
            "name": "How to use South Green HPC (IRD cluster)?",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
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            "accessConditions": "",
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            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-11-12",
            "end_date": null,
            "venue": "",
            "city": "Centre IRD Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
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            "registration_opening": null,
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            "courseMode": null
        },
        {
            "id": 254,
            "name": "Traitements bioinfo RNA-seq ",
            "shortName": "",
            "description": "\nObjectifs\n\nConnaitre les concepts et méthodes bioinformatiques utilisées pour l’analyse de données RNA-Seq eucaryote et procaryote.\n\n \nProgramme\n\nThéorie\nBases biologiques des études d’expression\nSéquençage NGS et RNA-Seq, présentation des différents types de séquenceurs\nMéthodes d’alignements spécifiques au RNA-Seq\nReconstruction de transcrits\nAssemblage de novo de transcriptomes\nQuantification\n \nPratique\nTP sur des données de type euraryote\nContrôle qualité\nNettoyage des données\nAlignement sur un génome de référence et épissage\nVisualisation de l’alignement\nDécouverte de nouveaux transcrits\nObtention d’un tableau de comptage\n \nLien avec d'autres modules \nL'analyse statistique des résultats du type d’analyses bioinformatiques effectuées dans ce module est traitée dans le module 16 [Stats & RNA-seq.\n",
            "homepage": "http://migale.jouy.inra.fr/",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [
                "NGS Data Analysis",
                "Analysis of RNAseq data",
                "Galaxy"
            ],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "Ce cycle est ouvert à l'ensemble des agents de l'INRA et aux extérieurs.\n",
            "maxParticipants": null,
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            "elixirPlatforms": [],
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            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-05-02",
            "end_date": null,
            "venue": "",
            "city": "jouy en josas",
            "country": "",
            "geographical_range": "",
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            "registration_opening": null,
            "registration_closing": null,
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        },
        {
            "id": 262,
            "name": "Galaxy : Reads alignment and SNP calling",
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