Handles creating, reading and updating events.

GET /api/event/?format=api&offset=420&ordering=geographical_range
HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "count": 605,
    "next": "https://catalogue.france-bioinformatique.fr/api/event/?format=api&limit=20&offset=440&ordering=geographical_range",
    "previous": "https://catalogue.france-bioinformatique.fr/api/event/?format=api&limit=20&offset=400&ordering=geographical_range",
    "results": [
        {
            "id": 386,
            "name": "Analyse de données NGS dédiée à la génomique végétale en Afrique de l'Ouest",
            "shortName": "",
            "description": "Les avancées spectaculaires des technologies de séquençage de 2ème et 3ème génération sont une véritable révolution pour la recherche en science de la vie. Ces techniques permettent le séquençage en quelques semaines de génomes entiers d’organismes complexes, générant une explosion du volume de données génomiques. \n\t\t\tToutefois l’analyse de telles masses d’informations nécessite des compétences en linux, en bioinformatique ainsi qu’une bonne connaissance et maîtrise de nombreux algorithmes et logiciels. La réalisation de ces analyses nécessite également l’accès à des ressources de calcul telles que des clusters de calcul. \n\t\t\tLe DP IAVAO et le LMI LAPSE en collaboration avec la plateforme bioinformatique South Green organisent, du 4 au 12 Octobre 2018, une formation en bioinformatique dédié à l’analyse de données de séquençage dont les objectifs sont de présenter les technologies de séquençage et les différentes analyses bioinformatiques pour exploiter au mieux cette masse de données afin de pouvoir réaliser des projets génomiques à grande échelle sur leurs modèles (plantes et pathogènes).\nPrérequis\nAucun\n\nProgramme\nLinux et lignes de commandes \nInitiation à l’utilisation du cluster du CERAAS \nPrésentation des technologies de séquençages \nAppel de SNP sur des données WGS \nPost analyse de données de SNPs\nOutils Genome Harvest \n\n\nObjectifs\nAprès la formation, les participants seront capables de :\nse connecter à un cluster Linux\nlancer des programmes/analyses bioinformatiques\ndéfinir les étapes pour analyser des données de séquençage\nanalyser des données de séquençage\nutiliser des gestionnaires de workflow tel que Galaxy ou TOGGLe\n\n\nInstructors\nChristine Tranchant (CT) - christine.tranchant@ird.fr\nNdomassi Tando (NT) - ndomassi.tando@ird.fr\nBertrand Pitollat (BP) - bertrand.pitollat@cirad.fr\nFrançois Sabot (SB) - francois.sabot@ird.fr\nManuel Ruiz (MR) - manuel.ruiz@cirad.fr\nGautier Sarah (GS) - gautier.sarah@cirad.fr\n\n",
            "homepage": "https://southgreenplatform.github.io/trainings//ngsTrainings/",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [
                {
                    "id": 12,
                    "name": "LAPSE",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/LAPSE/?format=api"
                },
                {
                    "id": 14,
                    "name": "IAVAO",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IAVAO/?format=api"
                }
            ],
            "organisedByTeams": [
                {
                    "id": 24,
                    "name": "South Green",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/South%20Green/?format=api"
                }
            ],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-10-03",
            "end_date": "2018-10-11",
            "venue": "",
            "city": "CERAAS, Thiès (Sénégal)",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 364,
            "name": "Standardizing phenotyping experimental data",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-10-17",
            "end_date": null,
            "venue": "",
            "city": "Webinar",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 299,
            "name": "Annotation and Analysis of Procaryotic genomes using the MicroScope platform",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Priced"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-03-12",
            "end_date": "2017-03-16",
            "venue": "",
            "city": "Faculté d'Evry Val d'Essonne",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 169,
            "name": "Metabarcoding analyses (using FROGS in Galaxy and Phyloseq)",
            "shortName": "",
            "description": "This course offers an introduction to metabarcoding analyses at two different levels (FROGS pipeline, PhyloSeq R package).",
            "homepage": "https://southgreenplatform.github.io/trainings//metabarcoding/",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-04-22",
            "end_date": null,
            "venue": "",
            "city": "Centre IRD, Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 345,
            "name": "Analyse de données métagénomiques 16S",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Priced"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-03-26",
            "end_date": "2017-03-29",
            "venue": "",
            "city": "Jouy en Josas",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 92,
            "name": "GCC 2017",
            "shortName": "",
            "description": "GCC2017 is the 8th annual gathering of the Galaxy community",
            "homepage": "https://gcc2017.sciencesconf.org",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/logoGCC_2019.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Meeting",
            "start_date": "2017-06-26",
            "end_date": "2017-06-30",
            "venue": "",
            "city": "Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 180,
            "name": "Elixir Training: Plant Genome Assembly and Annotation",
            "shortName": "",
            "description": "The course is aimed at researchers interested in learning more about genome assembly and annotation",
            "homepage": "",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [
                {
                    "id": 4,
                    "name": "IFB",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IFB/?format=api"
                },
                {
                    "id": 6,
                    "name": "Elixir-FR",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/Elixir-FR/?format=api"
                },
                {
                    "id": 50,
                    "name": "CIRAD",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CIRAD/?format=api"
                }
            ],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/elixir_node_france_0_0.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-09-24",
            "end_date": "2018-09-28",
            "venue": "",
            "city": "Cirad Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 263,
            "name": "Phylogénie moléculaire",
            "shortName": "",
            "description": "\nLes objectifs sont :\n1. Acquérir des connaissances théoriques et pratiques en phylogénie moléculaire.\n2. Être autonome dans la conduite d'une analyse phylogénétique.\n3. Maîtriser le choix, le paramétrage et l'exploitation des résultats des programmes de phylogénie.\nhttps://cnrsformation.cnrs.fr/\n\n",
            "homepage": "http://cnrsformation.cnrs.fr/stage-17007-Phylogenie-moleculaire-%28Montpellier%2…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [
                "Phylogeny",
                "Evolution and Phylogeny",
                "Molecular evolution",
                "Speciation dating",
                "Selection Detection",
                "Supertrees and Reconciliations",
                "Phylogenomics",
                "Genes and genomes"
            ],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "S'acquitter des frais d'inscription, être familiarisé avec les banques de données de séquences, avoir déjà utilisé les logiciels de base en bioinformatique, connaître les notions de base en statistiques (tests, lois probabilistes usuelles, méthodes simples d'estimation de paramètres), avoir des notions de programmation.\n",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2019-10-06",
            "end_date": "2019-10-10",
            "venue": "",
            "city": "Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 135,
            "name": "Analyse de données RNA-seq sous l’environnement Galaxy ",
            "shortName": "",
            "description": "Acquérir les connaissances générales sur les méthodes de séquençage à haut-débit...",
            "homepage": "http://www.biosciencesco.fr/formation-continue/bio-informatique/analyse-des-donn…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/logoPRABI_2.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-11-15",
            "end_date": "2017-11-17",
            "venue": "",
            "city": "Lyon",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 227,
            "name": "R introduction",
            "shortName": "",
            "description": "Cette formation a pour objectif d' acquérir les bases pour l'utilisation du langage R.",
            "homepage": "https://cnrsformation.cnrs.fr/stage-19024-Langage-R--introduction.html",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [
                {
                    "id": 6,
                    "name": "CNRS formation entreprise",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/CNRS%20formation%20entreprise/?format=api"
                },
                {
                    "id": 7,
                    "name": "LaBRI",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/LaBRI/?format=api"
                },
                {
                    "id": 8,
                    "name": "Centre de génomique fonctionnelle de Bordeaux  (CGFB)",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Centre%20de%20g%C3%A9nomique%20fonctionnelle%20de%20Bordeaux%20%20(CGFB)/?format=api"
                }
            ],
            "organisedByOrganisations": [
                {
                    "id": 1,
                    "name": "CNRS formation entreprises",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CNRS%20formation%20entreprises/?format=api"
                }
            ],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/SC_cgfb_0.jpg",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2019-10-22",
            "end_date": "2019-10-23",
            "venue": "",
            "city": "Centre de bioinformatique de Bordeaux (CGFB)",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 319,
            "name": "Initiation à l’Analyse des données RNAseq sous l’environnement Galaxy",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-11-07",
            "end_date": "2017-11-09",
            "venue": "",
            "city": "Nantes",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 149,
            "name": "Reads alignment and small size variants calling with Galaxy",
            "shortName": "",
            "description": "Introduction to NGS data, in particular Illumina technologies.",
            "homepage": "http://bioinfo.genotoul.fr/index.php/events/reads-alignment-and-small-size-varia…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [
                {
                    "id": 22,
                    "name": "Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api"
                }
            ],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/Sig_Genotoul_1_1_3.jpg",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-02-01",
            "end_date": "2018-02-02",
            "venue": "",
            "city": "Inra, 24 ch. de Borderouge, Auzeville",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 73,
            "name": "Développement d'outils galaxy pour l'imagerie",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-05-15",
            "end_date": "2017-05-16",
            "venue": "",
            "city": "Nantes",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 103,
            "name": "Data collection and registration of Patient organisations for Orphanet information scientists",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-09-18",
            "end_date": null,
            "venue": "",
            "city": "Paris (à distance",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 179,
            "name": "ChIP-seq, RNA-seq et Hi-C : traitement, analyse et visualisation de données ",
            "shortName": "",
            "description": "Maîtriser les principales méthodes et outils d'analyse des données ChIP-seq, RNA-seq et Hi=C ",
            "homepage": "https://cnrsformation.cnrs.fr/stage-18246-ChIP-seq%2C-RNA-seq-et-Hi-C--traitemen…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [
                {
                    "id": 49,
                    "name": "IGMM",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IGMM/?format=api"
                }
            ],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/logo-cnrs_0_2.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2018-06-26",
            "end_date": "2018-06-29",
            "venue": "",
            "city": "Montpellier",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 297,
            "name": "Formation CeSGO",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [
                "Free"
            ],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-09-20",
            "end_date": null,
            "venue": "",
            "city": "Rennes",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 530,
            "name": "Short-Read Alignment And Small Size Variants Calling - session 13/11/2023 - 14/11/2023",
            "shortName": "",
            "description": "This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular Illumina Solexa technologies with command line. You will discover the new sequence formats, the assembly formats and the known biases of these technologies. You will use mapping on reference genome software, polymorphisms detection with the GATK pipeline and alignment visualization software.\r\n\r\nThis training is focused on the practice. It consists of modules with a large variety of exercises:\r\n\r\nDay 1 (09:00 am to 12:30 am): Fastq format / Sequence quality. Read mapping.\r\nDay 1 (14:00 pm to 17:00 pm): SAM format. Visualisation.\r\nDay 2 (09:00 am to 17:00 am): Variant calling. VCF format. Variant annotation (SNPeff / SNPsift).\r\n \r\nThe session will take place in the room ‘salle de formation’ at INRAE center of Toulouse-Auzeville.\r\n\r\nPrerequisites: ability to use a Unix environment (see Unix training) and Cluster (see Cluster training).\r\n \r\nTool box: FastQC, BWA, Samtools, Picard tools, GATK, SnpSift / SnpEff, IGV.",
            "homepage": "https://bioinfo.genotoul.fr/index.php/events/alignment-and-small-size-variants-calling/",
            "is_draft": false,
            "costs": [
                "Non-academic: 550€ + 20% taxes (TVA)",
                "Academic but non-INRAE: 170 € + 20% taxes (TVA)",
                "For INRAE's staff: 150 € no VAT charged;"
            ],
            "topics": [
                "http://edamontology.org/topic_2885",
                "http://edamontology.org/topic_0102"
            ],
            "keywords": [],
            "prerequisites": [
                "Linux/Unix",
                "Cluster"
            ],
            "openTo": "Everyone",
            "accessConditions": "",
            "maxParticipants": 12,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [
                {
                    "id": 37,
                    "name": "MIAT 0875",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%200875/?format=api"
                }
            ],
            "organisedByTeams": [
                {
                    "id": 22,
                    "name": "Genotoul-bioinfo",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api"
                }
            ],
            "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png",
            "updated_at": "2024-06-10T12:36:44.820913Z",
            "type": "Training course",
            "start_date": "2023-11-13",
            "end_date": "2023-11-14",
            "venue": "",
            "city": "Toulouse-Auzeville",
            "country": "France",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": "2023-04-04",
            "registration_closing": "2023-11-08",
            "registration_status": "closed",
            "courseMode": "Onsite"
        },
        {
            "id": 239,
            "name": "Formation MicroScope 2020 session 1",
            "shortName": "",
            "description": "Annotation & Analysis Of Prokaryotic Genomes Using The MicroScope Platform",
            "homepage": "https://www.genoscope.cns.fr/agc/microscope/training",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [
                {
                    "id": 9,
                    "name": "MicroScope",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/MicroScope/?format=api"
                }
            ],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/MicroScope_logo_1.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2020-03-16",
            "end_date": "2020-03-20",
            "venue": "",
            "city": " Université Evry Paris-Saclay",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 121,
            "name": "Analyse avancée de séquences",
            "shortName": "",
            "description": "",
            "homepage": "",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [
                {
                    "id": 6,
                    "name": "CNRS formation entreprise",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/CNRS%20formation%20entreprise/?format=api"
                },
                {
                    "id": 7,
                    "name": "LaBRI",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/LaBRI/?format=api"
                },
                {
                    "id": 8,
                    "name": "Centre de génomique fonctionnelle de Bordeaux  (CGFB)",
                    "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/Centre%20de%20g%C3%A9nomique%20fonctionnelle%20de%20Bordeaux%20%20(CGFB)/?format=api"
                }
            ],
            "organisedByOrganisations": [
                {
                    "id": 1,
                    "name": "CNRS formation entreprises",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CNRS%20formation%20entreprises/?format=api"
                }
            ],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-10-22",
            "end_date": "2020-10-14",
            "venue": "",
            "city": "CBiB",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        },
        {
            "id": 88,
            "name": "« STATIMAGE», Statistiques pour l’imagerie de microscopie",
            "shortName": "",
            "description": "",
            "homepage": "https://france-bioimaging.org/fr/events/statimage-statistiques-pour-limagerie-de…",
            "is_draft": false,
            "costs": [],
            "topics": [],
            "keywords": [],
            "prerequisites": [],
            "openTo": "Internal personnel",
            "accessConditions": "",
            "maxParticipants": null,
            "contacts": [],
            "elixirPlatforms": [],
            "communities": [],
            "sponsoredBy": [],
            "organisedByOrganisations": [],
            "organisedByTeams": [],
            "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png",
            "updated_at": "2022-06-02T11:50:50.627601Z",
            "type": "Training course",
            "start_date": "2017-06-18",
            "end_date": "2017-06-20",
            "venue": "",
            "city": "CIEP, Sèvres",
            "country": "",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": null,
            "registration_status": "unknown",
            "courseMode": null
        }
    ]
}