Event List
Handles creating, reading and updating events.
GET /api/event/?format=api&offset=40&ordering=accessConditions
{ "count": 629, "next": "https://catalogue.france-bioinformatique.fr/api/event/?format=api&limit=20&offset=60&ordering=accessConditions", "previous": "https://catalogue.france-bioinformatique.fr/api/event/?format=api&limit=20&offset=20&ordering=accessConditions", "results": [ { "id": 23, "name": "TOGGLe, a workflow manager to performe large-scale NGS analysis", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2017-02-19", "end_date": null, "venue": "", "city": "Centre IRD Montpellier", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 344, "name": ": Analyse in silico de structures 3D de protéines. Modélisation par homologie de protéines homologues, sauvage et mutées, arrimage de ligands.", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2017-03-22", "end_date": "2017-03-23", "venue": "", "city": "Jouy en Josas", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 571, "name": "Développement d’une application avec R Shiny (session 2024)", "shortName": "Shiny application development (2024)", "description": "Objectifs pédagogiques\r\n\r\nÀ l’issue de la formation, les stagiaires connaîtront les principes de bases et le fonctionnement du package “Shiny”. Ils et elles seront capables de créer leurs premières applications web interactives à partir de scripts R. Les solutions de déploiement d’applications Shiny seront également abordées.\r\n\r\nProgramme\r\n\r\nPrincipes généraux et fonctionnement d’une application Shiny\r\nDéveloppement d’applications Shiny\r\nDéploiement d’applications Shiny", "homepage": "https://documents.migale.inrae.fr/trainings.html", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0605" ], "keywords": [ "Shiny" ], "prerequisites": [ "Basic knowledge of R" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/769/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 88, "name": "BioinfOmics", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/BioinfOmics/?format=api" } ], "organisedByTeams": [ { "id": 10, "name": "MIGALE", "url": "https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=api" } ], "logo_url": "https://migale.inrae.fr/sites/default/files/migale-orange_0.png", "updated_at": "2024-01-17T10:46:26.358781Z", "type": "Training course", "start_date": "2024-03-14", "end_date": "2024-03-14", "venue": "https://migale.inrae.fr/how-to-come", "city": "Jouy-en-Josas", "country": "France", "geographical_range": "", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/743/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/175/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/415/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2024-01-08", "registration_closing": "2024-02-29", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 477, "name": "Cluster - session 2022/10/11", "shortName": "", "description": "This training session is designed to help you deal with the platform compute cluster and data banks. You will launch your first processing batch on the cluster and will learn how to track and manage them. Organized jointly by the Sigenae and bioinfo genotoul platforms.", "homepage": "http://bioinfo.genotoul.fr/index.php/events/cluster-2/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [], "keywords": [ "Linux", "Cluster" ], "prerequisites": [ "Linux - Basic Knowledge" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": null, "updated_at": "2023-05-17T10:14:33.722250Z", "type": "Training course", "start_date": "2022-10-11", "end_date": "2022-10-11", "venue": "", "city": "Castanet Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-03-08", "registration_closing": "2022-10-04", "registration_status": "closed", "courseMode": "Online" }, { "id": 462, "name": "Principes FAIR dans un projet de bioinformatique - Session 2022", "shortName": "FAIR bioinfo - session 2022", "description": "L’Institut Français de Bioinformatique (IFB) organise en partenariat avec l’Institut de Biologie Intégrative de la Cellule (I2BC) une formation à destination des bioinformaticiens et biostatisticiens souhaitant mettre en oeuvre les principes “FAIR” (Facile à trouver, Accessible, Interopérable, Réutilisable) dans leurs projets d’analyse et de développement. Les concepts FAIR, initialement définis dans le contexte d’ouverture des données de la recherche, seront ici adaptés pour cadrer avec un projet type de développement et/ou analyse bioinformatique/biostatistique. Ainsi, la formation n’abordera pas les aspects “FAIR” spécifiques aux données mais introduira plusieurs outils permettant d’améliorer la reproductibilité des analyses.", "homepage": "https://moodle.france-bioinformatique.fr/course/view.php?id=9&username=guest", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0769" ], "keywords": [ "Computing Environments", "NGS Sequencing Data Analysis", "Workflow development" ], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 15, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/116/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [ { "id": 3, "name": "IFB", "url": "https://catalogue.france-bioinformatique.fr/api/eventsponsor/IFB/?format=api" } ], "organisedByOrganisations": [ { "id": 43, "name": "IFB-core", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IFB-core/?format=api" } ], "organisedByTeams": [], "logo_url": "https://www.france-bioinformatique.fr/wp-content/uploads/logo-ifb-couleur.svg", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2022-06-13", "end_date": "2022-06-15", "venue": "", "city": "Paris", "country": "France", "geographical_range": "National", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-01-26", "registration_closing": "2022-04-15", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 458, "name": "Initiation à Git / Git Initiation - 2021 Session 2", "shortName": "Git Initiation - 2021 S2", "description": "Objectifs\r\n- Savoir définir ce qu’est un outil de gestion de version\r\n- Être capable d’initialiser un entrepôt Git pour un projet\r\n- Être capable de définir quels fichiers inclure/exclure d’un projet\r\n- Savoir enregistrer localement une nouvelle version pour un projet\r\n- Savoir partager des modifications locales avec tous les contributeurs d’un projet\r\n- Savoir gérer des modifications en parallèle en utilisant les branches.\r\n- Connaître les bonnes pratiques pour contribuer à projet tiers\r\nProgramme :\r\n- Présentation des avantages de la gestion de versions (projets individuels & projets collaboratifs)\r\n- Présentation des principes de fonctionnement de Git\r\n- Présentation et mise en œuvre des commandes principales de Git (clone, checkout, add, rm, commit, merge,\r\npush, pull) ; en ligne de commande ou en utilisant une interface graphique (GitHub et GitLab)", "homepage": "https://abims.sb-roscoff.fr/training/courses", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_3372" ], "keywords": [], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 18, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/299/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 4, "name": "ABiMS", "url": "https://catalogue.france-bioinformatique.fr/api/team/ABiMS/?format=api" } ], "logo_url": "https://abims.sb-roscoff.fr/sites/default/files/abims.png", "updated_at": "2022-10-07T08:23:00.426374Z", "type": "Training course", "start_date": "2022-01-21", "end_date": null, "venue": "", "city": "Roscoff", "country": "France", "geographical_range": "National", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": "2021-12-15", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 70, "name": "Formation MIGALE - Annotation de génomes microbiens", "shortName": "", "description": "Module en préparation ...", "homepage": "http://migale.jouy.inra.fr/", "is_draft": false, "costs": [], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 10, "name": "MIGALE", "url": "https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=api" } ], "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/logo-inra_0_0_0.png", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2017-05-15", "end_date": null, "venue": "", "city": "Jouy en Josas", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 303, "name": "Développement d'outils galaxy pour l'imagerie", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [ "Free" ], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2017-05-15", "end_date": "2017-05-16", "venue": "", "city": "Nantes", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 608, "name": "LINUX - session 22/04/2024", "shortName": "", "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning sequence analysis. This training session has been designed to familiarize yourself with the platform resources and its organization. You will learn to access the platform from your work station, what is an Linux environment and how to use it, how to create and manipulate files, how to transfer them from and to your personal computer.\r\n\r\nThis training is focused on practice. It consists of 3 modules with a large variety of exercises:\r\n\r\n- Connect to « genotoul » server (09:00 am to 10:30 am): Platform presentation, Linux basics, opening an user account, Putty installation, first connection.\r\n- Files and basics commands (10:45 am to 12:00 pm): types of files and secure access, file manipulation commands, text editors and viewers, disk space management .\r\n- Transfers and file manipulation (14:00 pm to 17:00 pm): download/transfer, compress/uncompress, utility commands and data extraction, output redirections.", "homepage": "http://bioinfo.genotoul.fr/index.php/events/linux-2-2/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2024-03-26T14:24:31.157055Z", "type": "Training course", "start_date": "2024-04-22", "end_date": "2024-04-22", "venue": "", "city": "Castanet Tolosan", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [ { "id": 137, "name": "Linux slides", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Linux%20slides/?format=api" }, { "id": 138, "name": "Linux TP", "url": "https://catalogue.france-bioinformatique.fr/api/trainingmaterial/Linux%20TP/?format=api" } ], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2024-03-24", "registration_closing": null, "registration_status": "open", "courseMode": "Onsite" }, { "id": 582, "name": "Analyse primaire de données issues de séquenceurs nouvelle génération sous Galaxy : 2025", "shortName": "Analyse donées NGS sous Galaxy: 2025", "description": "Objectifs pédagogiques\r\nConnaître les concepts et méthodes bioinformatiques utilisés pour l’analyse primaire de données issues de séquenceurs nouvelle génération (NGS). Savoir effectuer un alignement sur un génome de référence, un assemblage de novo d’un génome bactérien\r\n\r\nProgramme\r\nThéorie\r\n* Présentation des différents types de technologies de séquençage (lectures longues et courtes)\r\n\r\nPratique : Analyse des données de séquençage d’un génome bactérien\r\n* Contrôle qualité\r\n* Assemblage de-novo\r\n* Nettoyage des données\r\n* Assemblage\r\n* Visualisation et statistiques sur l’assemblage\r\n* Alignement de lectures sur un génome de référence et visualisation\r\nTous les TPs seront réalisés sous l’environnement d’exécution de traitements Galaxy.", "homepage": "https://documents.migale.inrae.fr/trainings.html", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0092", "http://edamontology.org/topic_0102", "http://edamontology.org/topic_0196", "http://edamontology.org/topic_3168" ], "keywords": [ "Galaxy", "NGS" ], "prerequisites": [ "Galaxy - Basic usage" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/769/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" }, { "id": 88, "name": "BioinfOmics", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/BioinfOmics/?format=api" } ], "organisedByTeams": [ { "id": 10, "name": "MIGALE", "url": "https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=api" } ], "logo_url": "https://migale.inrae.fr/sites/default/files/migale-orange_0.png", "updated_at": "2025-01-23T15:28:28.758744Z", "type": "Training course", "start_date": "2025-03-21", "end_date": "2025-03-21", "venue": "https://migale.inrae.fr/how-to-come", "city": "Jouy-en-Josas", "country": "France", "geographical_range": "", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/396/?format=api", "https://catalogue.france-bioinformatique.fr/api/userprofile/743/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-01-22", "registration_closing": "2025-03-06", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 541, "name": "Pipelines et méthodes bioinformatiques pour l'analyse de données de séquençage (NGS) - session Octobre 2023", "shortName": "", "description": "Bilille propose des formations en partenariat avec CNRS Formation Entreprises à destination des chercheur-euse-s, enseignant-e-s-chercheur-euse-s, ingénieur-e-s, technicien-ne-s en biologie et médecine. \r\n\r\nObjectifs :\r\n- Comprendre les principes des méthodes d'analyse de données de séquençage à haut débit (NGS)\r\n- Comprendre les paramètres des méthodes et leur impact sur les résultats\r\n- Apprendre à identifier les outils d'analyse en fonction du jeu de données\r\n- Être autonome pour analyser des données dans un gestionnaire de workflow comme Galaxy\r\n- Savoir manipuler les fichiers de lecture de séquençage : extraction, préparation, filtrage / nettoyage\r\n- Savoir évaluer la qualité des données de séquençage\r\n- Savoir analyser des données de séquençage de génomes (avec ou sans génome de référence) et prendre du recul sur le protocole expérimental\r\n- Savoir analyser des données de RNA-seq (avec ou sans génome de référence) et prendre du recul sur le protocole expérimental", "homepage": "https://cnrsformation.cnrs.fr/pipelines-et-methodes-bioinformatiques-pour-analyse-de-donnees-de-sequencage", "is_draft": false, "costs": [ "Priced" ], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 12, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/487/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 1, "name": "CNRS formation entreprises", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/CNRS%20formation%20entreprises/?format=api" } ], "organisedByTeams": [ { "id": 3, "name": "Bilille", "url": "https://catalogue.france-bioinformatique.fr/api/team/Bilille/?format=api" } ], "logo_url": "https://bilille.univ-lille.fr/fileadmin/_processed_/9/2/csm_logo_bilille_complet_65be9bda8b.png", "updated_at": "2024-12-09T17:37:10.962175Z", "type": "Training course", "start_date": "2023-10-16", "end_date": "2023-10-20", "venue": "", "city": "Lille", "country": "FRANCE", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": "2023-10-13", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 620, "name": "Galaxy / Galaxy Initiation - 2024", "shortName": "Galaxy Initiation - 2024", "description": "Objectifs\r\n- Savoir exploiter l’environnement Galaxy pour être en mesure d’analyser ses données.\r\n- Être en mesure de créer ses workflows.\r\nProgramme\r\n- Téléchargement des données à traiter.\r\n- Manipulation de fichiers.\r\n- Traitement des données.\r\n- Visualisation des résultats.\r\n- Création de workflows.\r\n- Partage de résultats et de workflows.", "homepage": "https://abims.sb-roscoff.fr/training/courses", "is_draft": false, "costs": [ "Free" ], "topics": [ "http://edamontology.org/topic_0769" ], "keywords": [], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 18, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/299/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [ { "id": 4, "name": "ABiMS", "url": "https://catalogue.france-bioinformatique.fr/api/team/ABiMS/?format=api" } ], "logo_url": "https://abims.sb-roscoff.fr/sites/default/files/abims.png", "updated_at": "2025-01-23T13:52:11.506916Z", "type": "Training course", "start_date": "2024-05-27", "end_date": "2024-05-27", "venue": "", "city": "Roscoff", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2024-03-29", "registration_closing": "2024-04-21", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 478, "name": "Using sed and awk to modify large large text files - 2022/03/16", "shortName": "", "description": "Many analysis generate large result text files which have to be checked, merged, split, reduced. Several tools have been developed and are available on Unix to do this, including sed and AWK. During this course you will be trained to process large files with sed and AWK. Sed is tool enabling to select and process lines. You can easily insert, delete, modify, append lines to very large files with millions of lines. AWK will enable to perform more fine tuned file modifications based on columns. It includes also more mathematical and string functions. The course is based mainly on exercises with small sections presenting concepts and commands.", "homepage": "http://bioinfo.genotoul.fr/index.php/events/modify-and-extract-information-from-large-text-files-day-2-3/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [ "Programming Languages & Computer Sciences", "Linux" ], "prerequisites": [ "Linux/Unix" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2024-03-26T14:09:51.087577Z", "type": "Training course", "start_date": "2022-03-16", "end_date": "2022-03-16", "venue": "", "city": "Castanet Tolosan", "country": "France", "geographical_range": "National", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/338/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-03-08", "registration_closing": "2022-03-08", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 184, "name": "Data analysis", "shortName": "", "description": "", "homepage": "https://www.enseignement.biologie.ens.fr/spip.php", "is_draft": false, "costs": [], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/150x150.png", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2018-10-07", "end_date": "2018-10-11", "venue": "", "city": "Ecole Normale Supérieure", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 173, "name": "Anniversary RSAT/GINsim", "shortName": "", "description": "RSAT and GINsim are reaching their 20th and 15th anniversary, respectively.", "homepage": "https://www.ibens.ens.fr/spip.php", "is_draft": false, "costs": [], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 4, "name": "IFB - ELIXIR-FR", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/IFB%20-%20ELIXIR-FR/?format=api" } ], "organisedByTeams": [], "logo_url": "https://ressources.france-bioinformatique.fr/sites/default/files/rsat_20_anniversary-4e8db.jpg", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2018-05-16", "end_date": "2018-05-17", "venue": "", "city": "Ecole Normale Supérieure Paris", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 374, "name": "Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation", "shortName": "", "description": "", "homepage": "", "is_draft": false, "costs": [ "Free" ], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Internal personnel", "accessConditions": "", "maxParticipants": null, "contacts": [], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": "", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2017-12-17", "end_date": "2017-12-21", "venue": "", "city": "Institut Pasteur", "country": "", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": null, "registration_closing": null, "registration_status": "unknown", "courseMode": null }, { "id": 479, "name": "Using sed and awk to modify large large text files - session 2022/10/12", "shortName": "", "description": "Many analysis generate large result text files which have to be checked, merged, split, reduced. Several tools have been developed and are available on Unix to do this, including sed and AWK. During this course you will be trained to process large files with sed and AWK. Sed is tool enabling to select and process lines. You can easily insert, delete, modify, append lines to very large files with millions of lines. AWK will enable to perform more fine tuned file modifications based on columns. It includes also more mathematical and string functions. The course is based mainly on exercises with small sections presenting concepts and commands.", "homepage": "http://bioinfo.genotoul.fr/index.php/events/modify-and-extract-information-from-large-text-files-day-2-3/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [ "Programming Languages & Computer Sciences" ], "prerequisites": [ "Linux/Unix" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2024-03-26T14:09:59.037431Z", "type": "Training course", "start_date": "2022-10-12", "end_date": "2022-10-12", "venue": "", "city": "Castanet Tolosan", "country": "France", "geographical_range": "National", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/338/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-03-08", "registration_closing": "2022-10-05", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 700, "name": "Manipulation de données avec R, introduction à tidyverse : 2025", "shortName": "Introduction à tidyverse", "description": "Objectifs pédagogiques\r\nA l’issue de la formation, les stagiaires seront capables de :\r\n* utiliser les principales fonctions des packages dplyr et tidyr de l’écosystème du « tidyverse »\r\n* lire les données et les ranger dans un format « tidy »\r\n* manipuler les données : filtrer, sélectionner, trier, produire des résultats par groupe, fusionner plusieurs tables\r\n* mettre en forme et pivoter les tables de données\r\n\r\nProgramme\r\n* Principes du tidyverse\r\n* Principales fonctions de manipulation de données du package dplyr : ajouter de nouvelles variables, sélectionner des colonnes, filtrer des lignes, trier, grouper, fusionner des tables\r\n* Enchaînements des opérations à l’aide de « pipe »\r\n* Mise en forme, jointure et pivot de données avec le package tidyr\r\n* Mise en application sur un exemple d’analyse de données de transcriptomique.", "homepage": "https://documents.migale.inrae.fr/trainings.html", "is_draft": false, "costs": [ "Priced" ], "topics": [ "http://edamontology.org/topic_0605" ], "keywords": [ "R Language", "Tidyverse" ], "prerequisites": [ "Basic knowledge of R" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/769/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 82, "name": "INRAE", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/INRAE/?format=api" }, { "id": 88, "name": "BioinfOmics", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/BioinfOmics/?format=api" } ], "organisedByTeams": [ { "id": 10, "name": "MIGALE", "url": "https://catalogue.france-bioinformatique.fr/api/team/MIGALE/?format=api" } ], "logo_url": "https://migale.inrae.fr/sites/default/files/migale-orange_0.png", "updated_at": "2025-01-23T15:46:16.560558Z", "type": "Training course", "start_date": "2025-06-16", "end_date": "2025-06-17", "venue": "", "city": "Jouy-en-Josas", "country": "France", "geographical_range": "", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2025-01-21", "registration_closing": "2025-06-01", "registration_status": "closed", "courseMode": "Online" }, { "id": 466, "name": "Diplôme Universitaire en Bioinformatique Intégrative - session 2019 / University Diploma in Integrative Bioinformatics - 2019 session", "shortName": "DUBii 2019", "description": "La bioinformatique est devenue une compétence incontournable pour l'analyse de données de natures diverses : génomes, transcriptomes, protéomes, métabolomes, structures macromoléculaires, réseaux d'interactions. L'appropriation par les biologistes des méthodes et des outils de biostatistique et bioinformatique intégrative est un enjeu majeur pour la montée en compétence des équipes de recherche et des plateformes de service.\r\n\r\nL'université de Paris propose en partenariat avec l'Institut Français de Bioinformatique (IFB) la troisième édition du Diplôme Universitaire en Bioinformatique intégrative (DUBii). Cette formation s’adresse en priorité à des biologistes ou à des médecins souhaitant évoluer en compétences ou envisager une reconversion professionnelle et ayant déjà acquis des compétences (formation courte, autoapprentissage, expérience de terrain) en informatique ou bioinformatique / biostatistique (environnement Unix, Python ou R ou autre langage de programmation). \r\n\r\nLe DUBii fournira une formation théorique et pratique, complétée par une période d'immersion de 20 jours sur l'une des plateformes régionales de l'IFB, qui mobilisera, dans le cadre d'un projet tutoré, l'ensemble des méthodes et outils appris durant les cours pour réaliser un projet personnel de bioinformatique intégrative. Ce projet combinera des données propres à chaque participant produites dans son laboratoire (principe BYOD : “Bring Your Own Data”) ou collectées à partir de bases de données publiques. \r\n\r\n Cette formation se déroulera pendant 8 semaines réparties entre :\r\nLes cours : 4 semaines à raison de 4 jours/semaine en présentiel (96h)\r\nLe projet tutoré : 20 jours sur l'une des plateformes bioinformatique de l'IFB", "homepage": "https://ressources.france-bioinformatique.fr/fr/du-bii", "is_draft": false, "costs": [], "topics": [], "keywords": [], "prerequisites": [], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 20, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/116/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [], "organisedByTeams": [], "logo_url": null, "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2019-01-28", "end_date": "2019-06-14", "venue": "", "city": "Paris", "country": "France", "geographical_range": "National", "trainers": [], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2018-07-01", "registration_closing": "2018-10-15", "registration_status": "closed", "courseMode": "Onsite" }, { "id": 447, "name": "LINUX - session 2022/03/14", "shortName": "", "description": "This training session is organized by the Genotoul bioinfo platform and aims at learning sequence analysis. This training session has been designed to familiarize yourself with the platform resources and its organization. You will learn to access the platform from your work station, what is an Linux environment and how to use it, how to create and manipulate files, how to transfer them from and to your personal computer.\r\n\r\nThis training is focused on practice. It consists of 3 modules with a large variety of exercises:\r\n\r\n- Connect to « genotoul » server (09:00 am to 10:30 am): Platform presentation, Linux basics, opening an user account, Putty installation, first connection.\r\n- Files and basics commands (10:45 am to 12:00 pm): types of files and secure access, file manipulation commands, text editors and viewers, disk space management .\r\n- Transfers and file manipulation (14:00 pm to 17:00 pm): download/transfer, compress/uncompress, utility commands and data extraction, output redirections.", "homepage": "http://bioinfo.genotoul.fr/index.php/events/linux-2-2/", "is_draft": false, "costs": [ "Non-academic: 550€ + 20% taxes (TVA)", "Academic but non-INRAE: 170 € + 20% taxes (TVA)", "For INRAE's staff: 150 € no VAT charged;" ], "topics": [ "http://edamontology.org/topic_3316" ], "keywords": [], "prerequisites": [ "none" ], "openTo": "Everyone", "accessConditions": "", "maxParticipants": 10, "contacts": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/300/?format=api" ], "elixirPlatforms": [], "communities": [], "sponsoredBy": [], "organisedByOrganisations": [ { "id": 37, "name": "MIAT - Mathématiques et Informatique Appliquées de Toulouse", "url": "https://catalogue.france-bioinformatique.fr/api/organisation/MIAT%20-%20Math%C3%A9matiques%20et%20Informatique%20Appliqu%C3%A9es%20de%20Toulouse/?format=api" } ], "organisedByTeams": [ { "id": 22, "name": "Genotoul-bioinfo", "url": "https://catalogue.france-bioinformatique.fr/api/team/Genotoul-bioinfo/?format=api" } ], "logo_url": "http://bioinfo.genotoul.fr/wp-content/uploads/bioinfo_logo-rvb-petit.png", "updated_at": "2022-06-02T11:50:50.627601Z", "type": "Training course", "start_date": "2022-03-14", "end_date": "2022-03-14", "venue": "INRAE Occitanie Toulouse 24 Chemin de Borde Rouge – Auzeville CS 52627 31326 Castanet Tolosan cedex", "city": "Toulouse", "country": "France", "geographical_range": "National", "trainers": [ "https://catalogue.france-bioinformatique.fr/api/userprofile/344/?format=api" ], "trainingMaterials": [], "computingFacilities": [], "realisation_status": "past", "registration_opening": "2022-01-24", "registration_closing": "2022-03-07", "registration_status": "closed", "courseMode": "Onsite" } ] }
