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            "venue": "Access to the INRAE center reception\r\n By car\r\n\r\n    Take the N118 from the Paris rotary Porte de Saint-Cloud > Pont de Sèvres > Follow direction Bordeaux/Nantes – take exit 6A Jouy-en-Josas/Bièvres\r\n    Take the N12 from Plaisir > Follow direction Paris exit 1 towards the D53\r\n    Take the A12 Rambouillet > Jouy – take exit 2 via the D446\r\n\r\n By the RER (train to the suburbs)\r\n\r\nRER C Line: Get off at the Jouy-en-Josas station. The research center is a 15 minute walk (you must walk towards the town hall (Mairie de Jouy).\r\n\r\n    From Chatelet-Les Halles, take the RER B line until the Massy-Palaiseau station (32 min.) then take the RER C line CIME train (14 min.)\r\n    From Versailles-Chantier RER C station take the VICK or VITY train (8 min.)\r\n    From the Bibliothèque François Mitterand RER C station, take the CIME train (1 hour)\r\n\r\n From the Orly Airport\r\n\r\nTake the bus « Paris par le train » to the Pont de Rungis RER C train station. Then take the RER C train CIME towards Versailles Chantiers. Get off at the Jouy-en-Josas station.\r\n\r\nStops of the “Paris par le train” bus :\r\n\r\n    Paris-Orly Sud : porte C, stop 6\r\n    Paris-Orly Ouest : porte G on the Arrivals level.\r\n\r\n From the Charles de Gaulle - Roissy Airport\r\n\r\nTo go from the Paris-Charles de Gaulle airport to Jouy-en-Josas you may take :\r\n\r\n    the RER B train towards St Remy les Chevreuses. Get off at the Massy Palaiseau station\r\n    the RER C train towards Versailles Chantiers (CIME trains). Get off at Jouy-en-Josas.",
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            "homepage": "https://mesocentre.uca.fr/actualites/pratiques-fair-en-bioinformatique-pour-des-analyses-reproductibles",
            "is_draft": false,
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                "Free to academics"
            ],
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                "http://edamontology.org/topic_0091",
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                "R"
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                "Linux - Basic Knowledge"
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            "openTo": "Everyone",
            "accessConditions": "Having an account on Mesocentre Clermont Auvergne Infrastructure",
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            "updated_at": "2025-02-17T13:11:26.183643Z",
            "type": "Training course",
            "start_date": "2025-05-19",
            "end_date": "2025-02-21",
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            "city": "Aubière",
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            "geographical_range": "",
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            "realisation_status": "future",
            "registration_opening": "2025-02-17",
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            "id": 537,
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            "homepage": "https://mesocentre.uca.fr/actualites/pratiques-fair-en-bioinformatique-pour-des-analyses-reproductibles",
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            "openTo": "Everyone",
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                    "id": 94,
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            "logo_url": "https://mesocentre.uca.fr/medias/photo/logoaubi-2019minus_1553844844490-jpg?ID_FICHE=41175",
            "updated_at": "2023-06-14T10:22:28.365980Z",
            "type": "Training course",
            "start_date": "2023-07-10",
            "end_date": "2023-07-17",
            "venue": "Turing Building\r\nRoom A09",
            "city": "Clermont-Ferrand",
            "country": "France",
            "geographical_range": "National",
            "trainers": [],
            "trainingMaterials": [],
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            "realisation_status": "past",
            "registration_opening": "2023-06-14",
            "registration_closing": "2023-06-30",
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            "homepage": "https://mesocentre.uca.fr/actualites/formation-2022-pratiques-fair-en-bioinformatique",
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            ],
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                "http://edamontology.org/topic_0091",
                "http://edamontology.org/topic_3068"
            ],
            "keywords": [
                "Methodology",
                "Snakemake",
                "Docker"
            ],
            "prerequisites": [
                "Linux - Basic Knowledge"
            ],
            "openTo": "Everyone",
            "accessConditions": "Having an account on Mesocentre Clermont Auvergne Infrastructure",
            "maxParticipants": 15,
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                    "id": 94,
                    "name": "Université Clermont Auvergne",
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            "updated_at": "2023-06-14T10:22:47.972169Z",
            "type": "Training course",
            "start_date": "2022-11-28",
            "end_date": "2022-12-02",
            "venue": "Plateforme AuBi\r\nMésocentre\r\nDOSI\r\nUCA",
            "city": "CLERMONT-FERRAND",
            "country": "France",
            "geographical_range": "National",
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            "trainingMaterials": [],
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            "realisation_status": "past",
            "registration_opening": "2022-11-01",
            "registration_closing": "2022-11-25",
            "registration_status": "closed",
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        },
        {
            "id": 708,
            "name": "New session of Introduction à l'utilisation d'un cluster de calcul",
            "shortName": "",
            "description": "Knowledge of the concepts and best practices for using the computing resources of the mesocenter cluster Clermont Auvergne in a bioinformatics context.\r\nBecome familiar with the work environment of the computing cluster, become autonomous in the use of its resources and learn to use a scheduler. \r\nPresentation of the resources accessible on the cluster (computing nodes, storage spaces, tools).\r\nConcept of jobs, queues and parallel computing.\r\nJob management (submission, follow-up, deletion).",
            "homepage": "https://mesocentre.uca.fr/",
            "is_draft": false,
            "costs": [
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            ],
            "topics": [
                "http://edamontology.org/topic_0605",
                "http://edamontology.org/topic_0091"
            ],
            "keywords": [],
            "prerequisites": [
                "Linux and knowledge of NGS formats"
            ],
            "openTo": "Internal personnel",
            "accessConditions": "Have an account on the Mesocentre UCA computing cluster (make a request if necessary on the site https://hub.mesocentre.uca.fr)\r\nAlternation of theoretical courses and practical work.\r\nCOME WITH A LAPTOP with an operational Eduroam connection.\r\nThe training is in French.",
            "maxParticipants": 10,
            "contacts": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/261/?format=api"
            ],
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            "organisedByOrganisations": [
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            "organisedByTeams": [
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                    "name": "AuBi",
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            ],
            "logo_url": "https://mesocentre.uca.fr/medias/photo/logoaubi-2019minus_1553844844490-jpg?ID_FICHE=41175",
            "updated_at": "2025-02-17T13:03:10.078913Z",
            "type": "Training course",
            "start_date": "2025-04-16",
            "end_date": "2025-04-16",
            "venue": "",
            "city": "Clermont-Ferrand",
            "country": "France",
            "geographical_range": "Local",
            "trainers": [
                "https://catalogue.france-bioinformatique.fr/api/userprofile/261/?format=api"
            ],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "future",
            "registration_opening": "2025-02-17",
            "registration_closing": "2025-04-07",
            "registration_status": "open",
            "courseMode": "Onsite"
        },
        {
            "id": 707,
            "name": "New session of Initiation à la ligne de commande",
            "shortName": "",
            "description": "L’objectif de cette formation est de se familiariser à l’utilisation de la ligne de commande pour un usage sur un cluster de\r\ncalcul afin d’acquérir les bases pour le traitement de données biologiques.\r\nPrésentation de l’infrastructure du cluster de calcul du Mésocentre Clermont Auvergne.\r\nIntroduction à l’environnement Linux.\r\nInitiation à un langage de scripting avec le shell Bash.\r\nManipulation en ligne de commande de fichiers de données d'origine biologique.\r\nComment se connecter au serveur de calcul.\r\nApprentissage du langage informatique Bash et comment naviguer dans un environnement Linux.\r\nExercices pratiques de saisie de commandes sur un terminal sans interface graphique.\r\nApprentissage de la gestion de fichiers, comment les créer, gérer les droits d’accès, les manipuler et les transférer sur le\r\ncluster de calcul ou les récupérer sur son poste de travail local.",
            "homepage": "https://mesocentre.uca.fr/",
            "is_draft": false,
            "costs": [
                "Free to academics"
            ],
            "topics": [
                "http://edamontology.org/topic_0605",
                "http://edamontology.org/topic_0091"
            ],
            "keywords": [],
            "prerequisites": [
                "Licence"
            ],
            "openTo": "Everyone",
            "accessConditions": "Avoir un compte sur le cluster de calcul du Mésocentre Clermont Auvergne (faire une demande le cas échéant sur le site\r\nhttps://hub.mesocentre.uca.fr)\r\nVENIR AVEC UN ORDINATEUR PORTABLE muni d’une connexion à Eduroam opérationnelle.",
            "maxParticipants": 10,
            "contacts": [
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            ],
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                    "name": "AuBi",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/AuBi/?format=api"
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            ],
            "logo_url": "https://mesocentre.uca.fr/medias/photo/logoaubi-2019minus_1553844844490-jpg?ID_FICHE=41175",
            "updated_at": "2025-02-17T12:47:28.918467Z",
            "type": "Training course",
            "start_date": "2025-04-09",
            "end_date": "2025-04-09",
            "venue": "",
            "city": "Aubière",
            "country": "France",
            "geographical_range": "Local",
            "trainers": [
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            ],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "future",
            "registration_opening": "2025-02-17",
            "registration_closing": "2025-04-02",
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        },
        {
            "id": 704,
            "name": "Mathematical and Computational Evolutionary Biology (MCEB)",
            "shortName": "MCEB",
            "description": "MCEB will take place in Granada, Spain for its 2025 edition. The meeting will put the emphasis on methods and models for phylogenomics and population genomics. Beyond this year's themes, general concepts, models, methods and algorithms will be presented and discussed, just as in the previous editions of MCEB. As usual, the meeting will bring together researchers originating from various disciplines: mathematics, statistics, computer science, phylogenetics, population genetics, molecular epidemiology, biodiversity and macroevolution... Keynote speakers will\r\nintroduce a field of research and discuss their own work in this field. Afternoon will be for short presentations and posters, with plenty of time for discussions. We will stop early every day, thus leaving time for other activities.\r\n\r\nKEYNOTES:\r\n** Sophie Abby - \"Evolution of biosynthetic pathways in Bacteria\"\r\n** Richard Durbin - \"Population genome variation – going beyond SNPs\"\r\n** Lisa Pokorny Montero - \"Genomic approaches to the study of plant evolution\"\r\n** Harald Ringbauer - \"Advanced ancient DNA analysis\"\r\n** Kristina Wicke - \"Inference of phylogenetic networks\"\r\n** Jaime Huerta-Cepas - \"Evolutionary significance of unknown microbial genes\"",
            "homepage": "https://mceb2025.sciencesconf.org/",
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            ],
            "topics": [
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                "http://edamontology.org/topic_3293",
                "http://edamontology.org/topic_3050",
                "http://edamontology.org/topic_3056"
            ],
            "keywords": [
                "Biostatistics",
                "Biodiversity",
                "Evolution and Phylogeny",
                "Phylogenetics"
            ],
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            "openTo": "Everyone",
            "accessConditions": "PRACTICAL INFORMATION\r\n\r\n** Place: \"Carmen de la Victoria\" and \"Corrala de Santiago\", Granada, Spain.\r\n\r\n** Dates: May 12-16th, 2025. The conference will begin Monday evening and will\r\n  end at about 3pm on Friday.\r\n\r\n** Fees: Between 650€ to 850€. Fees will vary depending on the type of room,\r\n  shared (for students) or individual. They include accommodation for four nights\r\n  with breakfast, lunches, coffee breaks, two dinners and drinks around posters\r\n  from Monday night until Friday lunchtime included.\r\n\r\n** Deadline for abstract submission and pre-registration: February 21, 2025.\r\n\r\n** Notification of acceptance: March 15, 2025.",
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            ],
            "logo_url": null,
            "updated_at": "2025-02-17T08:51:35.482439Z",
            "type": "Meeting",
            "start_date": "2025-05-12",
            "end_date": "2025-05-16",
            "venue": "Carmen de la Victoria\" and \"Corrala de Santiago\"",
            "city": "Granada",
            "country": "Spain",
            "geographical_range": "International",
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            "realisation_status": "future",
            "registration_opening": "2025-02-01",
            "registration_closing": "2025-05-05",
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            "id": 506,
            "name": "Annotation and analysis of prokaryotic genomes using the MicroScope platform - March 2023",
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            "description": "In an effort to inform members of the research community about our annotation methods, to provide training for collaborators and other scientists who use the MicroScope platfom, and to inform scientific public on the analysis available in PkGDB (Prokaryotic Genome DataBase), we have developed a 4.5-day course in Microbial Genome Annotation and Comparative Analysis using the MaGe graphical interfaces.\r\n\r\nThis course will familiarize attendees with LABGeM’s annotation pipeline and the manual annotation software MaGe (Magnifying Genome) . No specific bioinformatics skill is required: detailed instruction on the algorithm developed in each annotation methods can be found in specific training courses on «Genomic sequences analysis». Here we focus on the general idea behind each method and, above all, the way you can interpret the corresponding results and combine them with other evidences in order to change or correct the current automatic functional annotation of a given gene, if necessary.\r\n\r\nThis course will also describe how to perform effective searches and analysis of procaryotic data using the graphical functionalities of the MaGe’s interfaces. Because of the numerous pre-computation available in our system (results of “common” annotation tools, synteny with all complete bacterial genomes, metabolic pathway reconstruction, fusion/fission events, genomic islands, …), many practical exercises allow attendees to get familiar with the use the MaGe graphical interfaces in order to efficiently explore these sets of results.",
            "homepage": "https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/training-annotation-analysis-of-prokaryotic-genomes-using-the-microscope-platform/",
            "is_draft": false,
            "costs": [
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            ],
            "topics": [
                "http://edamontology.org/topic_0797",
                "http://edamontology.org/topic_0085",
                "http://edamontology.org/topic_3301"
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            "keywords": [
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                "Genome analysis",
                "Structural and functional annotation of genomes"
            ],
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            ],
            "openTo": "Everyone",
            "accessConditions": "External training sessions can also be scheduled on demand, in France or abroad. See : https://labgem.genoscope.cns.fr/professional-trainings/microscope-professional-trainings/external-microscope-professional-training-sessions/",
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            "sponsoredBy": [
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                    "id": 15,
                    "name": "Laboratory of Bioinformatics Analyses for Genomics and Metabolism",
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                }
            ],
            "organisedByOrganisations": [
                {
                    "id": 67,
                    "name": "University of Paris-Saclay",
                    "url": "https://catalogue.france-bioinformatique.fr/api/organisation/University%20of%20Paris-Saclay/?format=api"
                }
            ],
            "organisedByTeams": [
                {
                    "id": 9,
                    "name": "MicroScope",
                    "url": "https://catalogue.france-bioinformatique.fr/api/team/MicroScope/?format=api"
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            ],
            "logo_url": "https://labgem.genoscope.cns.fr/wp-content/uploads/2021/06/GENOSCOPE-LABGeM.jpg",
            "updated_at": "2023-05-17T09:53:07.876054Z",
            "type": "Training course",
            "start_date": "2023-03-20",
            "end_date": "2023-03-24",
            "venue": "",
            "city": "Evry",
            "country": "France",
            "geographical_range": "",
            "trainers": [],
            "trainingMaterials": [],
            "computingFacilities": [],
            "realisation_status": "past",
            "registration_opening": null,
            "registration_closing": "2023-02-20",
            "registration_status": "closed",
            "courseMode": "Onsite"
        },
        {
            "id": 436,
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